ggKbase home page

RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_6842_6

Organism: Omnitrophica WOR_2 bacterium RIFCSPLOWO2_02_FULL_50_19

near complete RP 41 / 55 BSCG 41 / 51 ASCG 6 / 38 MC: 2
Location: comp(4527..5198)

Top 3 Functional Annotations

Value Algorithm Source
OmpA family protein id=3681815 bin=GWF2_OP3_43_52 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 225.0
  • Bit_score: 199
  • Evalue 3.20e-48
chemotaxis protein MotB similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 194.0
  • Bit_score: 145
  • Evalue 1.50e-32
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 433
  • Evalue 1.80e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_WOR_2_51_24 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 672
ATGTTTAAGATCTCAAGATTAAGCGTTGTCGCATTATTATTGGTTGTAGCTTTTACCCTCTCCGGCTGCGCTGTCGGCTTCTACAGGCGCAGTCCTAACGACATAAAGAAGATAGAAGACCTGAGGGCCGAGGTCGAGCGCCTCAAATTATTAAGGGAGCATGAGAACAGGGAGCTCGAGGCCGTCAAGGCCGAGCTCGAGAAGAGATTGCGCGGTGAAAAAGGCGTGAGCATCGGCCTAAGTGAACGCGGTCTCGTCGTGACATTCCTCGCCGAGGTGCTTTTCGATTCCGGAAAGGCGAAGATAAGGTCAGAGGCGCATAATGTCCTGGACAAGGTCACGAAAGTAATAAACGAAAAAGCATCGGACAGGAATCTCGCGATAGAAGGATACACGGATAACGAGCCTATAAAGAAATCCGGCTGGAAATCGAACTGGGAACTCTCTACGGCAAGGGCTACATCGGTCCTGCATTATCTGGAAGAGAGAGGGATCGAGCCCAAGAAGTTGCAGGCCACGGGTTACGGCGAATATCGCCCCGTAGCCTCCAATGATACGGTTGAGGGAAGGCAGAAGAACAGAAGGGTAGAGATCATAATCCTGCCTAAGATGTCAAAGGCGGAATCCGAATTCCTTAAGGAGCATGAGAAGGAATCCGAATACATAAAATAA
PROTEIN sequence
Length: 224
MFKISRLSVVALLLVVAFTLSGCAVGFYRRSPNDIKKIEDLRAEVERLKLLREHENRELEAVKAELEKRLRGEKGVSIGLSERGLVVTFLAEVLFDSGKAKIRSEAHNVLDKVTKVINEKASDRNLAIEGYTDNEPIKKSGWKSNWELSTARATSVLHYLEERGIEPKKLQATGYGEYRPVASNDTVEGRQKNRRVEIIILPKMSKAESEFLKEHEKESEYIK*