ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_205272_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 3..2372

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025571EC similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 789.0
  • Bit_score: 1418
  • Evalue 0.0
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 789.0
  • Bit_score: 1631
  • Evalue 0.0
organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 789.0
  • Bit_score: 1384
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2370
GAGCCGAGCCGGCCAGGGATGAACGACCAGACGCCGATGAATCAGGCGCCGCTGTTCATTACCGCCAAAGCCTCGCGCTACGAGCAGGAACAGCAGGTCGCCACCCTGGCCGGCGATGTGGTGTTGCGCCAGGCCGGCATGCAGGTCGAGGCTGACGAAGCCAGCCTGCACCAGGCGGAGAACCGCGGCGAACTGATCGGCAACGTGCGCCTGCGCGATCAGGGCGTGCTGGTAGTCGGTGATCGCGCCGAACTGCAACTGGACAACGGCGAAGCCAAGGTCGACAACGCCGAATACGTGCTGCACAAAAGCCATGTACGCGGCAGTGCACTCTACGCCAAGCGCGAAGAAACCGCGGTTATCCGCCTGAAAGACGGCACCTACACCTCCTGCGAACCGGGCAGCAACGCCTGGCACCTGAAGGGCAACAACGTCACCCTGAACCCGGCGACCGGCTTCGGTACTGCGACCAACGTGACCCTGCGGGTGAAGGACTTCCCGGTTTTCTACACCCCCTACATCTACTTCCCGATTGACGACCGTCGTCAGTCCGGCTTCCTGCCGCCGAGCATCAGCAGCTCCAGCGATAACGGCATGACGCTGCAAACGCCCTACTACTTCAACCTGGCGCCGAACTACGACGCCACGCTCTATCCGACCTACATGAGCGACCGCGGCCTGCTCATCGAAGGCGAGGGTCGTTACCTGACCAAGAGCAGCGAAGGCCAGTTTGGCGCGGCTTACCTCGACGACAGCAACGACGACCGCAAACTGCAGTCGGACTACGAAGACCAGCGCTGGCTCTACAGCTGGCAGCACAAGGGCGGCCTCGACTCGCGCCTGCTGGCCGAAGTCGACTACACCGACATCAGCGATCCCTATTACTTCCAGGACCTGGACACCGATCTCGGCATCGATACCACCACCTACGTCAACCAGCGCGGCACCCTGACCTATCGCGGCGGCAGCTATACCGCGCGCCTCAATGCGCACGCCTACGAACTGGCCAATATCACCGATATCACGCCGTACGACCGCCTGCCGCAGATCACCCTGGACGGCGCCCTGCCGTTCCAGCCGGCTGGCCTGAACTTCAGCTACGGCAGCGAACTGGTGCGCTTCGACCGCGACTTGCGCGACGGCAGCTTCATCAATGAAGAGGGCGTGGCCGAACAGCTCTGGTATGACGAGCGCCTGCGCGGCCTGGCCCGCGCCAACGGCACGCGCCTGCACCTGGAGCCGGCCGTCAGCCTGCCGCTGAACTGGAGTTGGGGCTTTCTCAAGCCCCAGGTTAAATACCTGCAGACCAATTACGACCTGAGCCTCGACCAGCAGGGCAAGAACAGCCTGCTGGCCGAACAGGAATTCGACAGCAGCCAGGATCGCGGCGTCCCCATCGCCAGCGTCGATAGCGGCCTGTACTTCGACCGCGACACCACCTTGTTCGGCAAGTCCTACCGCCAGACCCTGGAGCCACGGCTGTTCTACCTCTATGTCCCCGAGGAAGACCAGACCGACATTCCGGTCTTCGACACTGGCGAGAGCAACTTCAGTTATGCGTCGCTGTTCCGCGAGAACCGTTTCTCCGGCAAGGACCGCATCGGCGACGAGAACAAGCTGTCGCTGGGCCTGACCAACCGCTGGATCGAGAGCAACGGTTTCGAGCGTCAACGCTTCAGCATCGGCCAGGCCTTCTACTTCGAAGACCGCAAGGTGCAGATGCCGGGCATCGACTACCGCACCCGTGATGACGCCCAGGCCTCGCAATCGCCTTACGCTCTGGAGTACCTGTATCGCTTCAACCGCGACTGGCGCTTCTCCTCGGACTTCAACTGGGACCCGGACACCCGCAGCACCCGCTCGGGCAGCGCGATGTTCCACTACCAGCCGGAAGACAACCCGAACAAGGTGGTCAATGCCGGTTATCGCTACCGCAACGACACCATCCGCTTCGACCAGGCTACCGGTAACTGGGTGGTTGGTGGCGGCGACTTCGGCACCCCGGGCACCCCGAACTACATCAAGGACTACTACAAGGTCAGCCAGCATGACTTCTCGGTGATCTGGCCGATCGTCCCGCAGTGGAGCGTGATCTCTCGCTGGCAGTACGATTACGCTCGTGATCGCACCCTCGAAGCCTTCGGCGGTTTCGAGTATGACAACTGCTGCTGGAAGCTGCGCCTGATCAATCGCTACTGGATCGACTATGACGAAGTCAGCCTGAATCCGTCGCTGAATGATGAGCCGGACCGCGGCATTTTCCTGCAAATCGTCCTCAAAGGTTTGGGTGGCGTGACAGGCAACAAGGTTGAGACTTTCCTCGATCAAGGCATTCAAGGTTATCGTGAACGTGAAGATCAAGCTTTCTGA
PROTEIN sequence
Length: 790
EPSRPGMNDQTPMNQAPLFITAKASRYEQEQQVATLAGDVVLRQAGMQVEADEASLHQAENRGELIGNVRLRDQGVLVVGDRAELQLDNGEAKVDNAEYVLHKSHVRGSALYAKREETAVIRLKDGTYTSCEPGSNAWHLKGNNVTLNPATGFGTATNVTLRVKDFPVFYTPYIYFPIDDRRQSGFLPPSISSSSDNGMTLQTPYYFNLAPNYDATLYPTYMSDRGLLIEGEGRYLTKSSEGQFGAAYLDDSNDDRKLQSDYEDQRWLYSWQHKGGLDSRLLAEVDYTDISDPYYFQDLDTDLGIDTTTYVNQRGTLTYRGGSYTARLNAHAYELANITDITPYDRLPQITLDGALPFQPAGLNFSYGSELVRFDRDLRDGSFINEEGVAEQLWYDERLRGLARANGTRLHLEPAVSLPLNWSWGFLKPQVKYLQTNYDLSLDQQGKNSLLAEQEFDSSQDRGVPIASVDSGLYFDRDTTLFGKSYRQTLEPRLFYLYVPEEDQTDIPVFDTGESNFSYASLFRENRFSGKDRIGDENKLSLGLTNRWIESNGFERQRFSIGQAFYFEDRKVQMPGIDYRTRDDAQASQSPYALEYLYRFNRDWRFSSDFNWDPDTRSTRSGSAMFHYQPEDNPNKVVNAGYRYRNDTIRFDQATGNWVVGGGDFGTPGTPNYIKDYYKVSQHDFSVIWPIVPQWSVISRWQYDYARDRTLEAFGGFEYDNCCWKLRLINRYWIDYDEVSLNPSLNDEPDRGIFLQIVLKGLGGVTGNKVETFLDQGIQGYREREDQAF*