ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_281801_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(261..1313)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AJ66_PSEF1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 350.0
  • Bit_score: 593
  • Evalue 1.20e-166
two component, sigma54 specific, Fis family transcriptional regulator; K10126 two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_ similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 350.0
  • Bit_score: 676
  • Evalue 2.60e-191
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 350.0
  • Bit_score: 593
  • Evalue 3.40e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
CTCGACAGCGTGCGCCGCGCCCTCGCCCTGCGCCGCCTGGTCCTGGATAACCGCAGCCTGCGCCTGGCCCTGGCCGACCGCCAGCAGTTGAGCGCGCGCCTGGTCGGCCAGTCGCCGGCCATGGCGCGCCTGCGCGAGCAGATCGGCGCCCTGGCCAACATCAGCGCCGACGTGTTGATCCTCGGTGAGACCGGCGCCGGCAAGGAAGTGGTCGCCCGCGCCCTGCATGACCTGTCGAATCGCCGCGACGGCCCCTTCGTCGCCATCAACGCCGGCGCCCTGGCCGAGTCGGTGGTGGAAAGCGAACTGTTCGGCCACGAACCGGGCGCCTTTACCGGGGCGCAAAAACGCCGCATCGGCAAGTTCGAGTTCGCCAACGGCGGCACCCTGTTCCTCGATGAAATCGAGAGCATGAGTCTGGAAGTCCAGGTCAAGCTGCTGCGCCTGCTGCAGGAGCGGGTGGTCGAACGCCTCGGCGGCAACCAGTTGATCCCGCTGGATATCCGGGTGATCGCCGCGACCAAGGAAGACCTGCGCCAGGCCGCCGACCAGGGCCGTTTCCGCGCCGACCTGTATTACCGGCTGAACGTCGCCCCGCTGCGCATTCCGCCCCTGCGCGAGCGCGGCGAAGACGCCCTGCTGCTGTTCCAGCACTTCGCCGATGGCGCCAGCGCCCGCCACGGCCTGCCCGTGCGCGAGCTGCAACCTGGGCAGCGCGCCATGCTCCTGCGTCACCCCTGGCCGGGCAATGTGCGCGAACTGCAGAATGCCGCGGAGCGCTTCGCCATCGGTCTCGACCTGGGCCTGGATCTCGGCCTGGAGCTGAACCTGGACCGCCCGCAAAACGGCGTGCCGCCCAGGGGTAACCTCAGCGAGCAGGTCGAAGCCTTCGAGCGCGCCATGATCGCCGCCGAACTGAGTCGTGCCCATGGTTCGCTGCGCAGCCTGGCCGAAGCCCTCGGCGTGCCGCGCAAGACCCTGCACGATAAATTGCGCAAGCATGGCCTGAGCGTCGCCGACGCTGGCGGAAGCTCGCCAGATGACTTCGACTGA
PROTEIN sequence
Length: 351
LDSVRRALALRRLVLDNRSLRLALADRQQLSARLVGQSPAMARLREQIGALANISADVLILGETGAGKEVVARALHDLSNRRDGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDEIESMSLEVQVKLLRLLQERVVERLGGNQLIPLDIRVIAATKEDLRQAADQGRFRADLYYRLNVAPLRIPPLRERGEDALLLFQHFADGASARHGLPVRELQPGQRAMLLRHPWPGNVRELQNAAERFAIGLDLGLDLGLELNLDRPQNGVPPRGNLSEQVEAFERAMIAAELSRAHGSLRSLAEALGVPRKTLHDKLRKHGLSVADAGGSSPDDFD*