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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_100965_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 249..1154

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DPG7_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 293.0
  • Bit_score: 528
  • Evalue 4.00e-147
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 293.0
  • Bit_score: 528
  • Evalue 1.10e-147

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGATCTCGCCACCCTCAATGCCTTTATCGCCATCGCCGAACTGGGCAGCTTCTCCGAGGCCGCCGAACGCCTGCACCTGACCCAACCGGCCGTGAGCAAGCGCATCGCCAGCCTGGAACAACAACTCAATGTACGCCTGTTCGACCGCCTGGGTCGTGAGGTGAGCCTGACCGAGGCCGGCCGCGCCCTGCTGCCACGCGCCTACCAGATTCTCAATGTGCTGGACGATACCCGCCGCGCCCTGAACAACCTCAGTGGCGAGGTCAGCGGCCGGCTGACATTGGCCACCAGCCACCACATCGGCCTGCATCGTTTGCCGCCCTTGCTGCGTGCCTTCACCCGCGCACACCCGCAGGTGGCGTTGGACATCCAGTTTCTCGACTCCGAAGTAGCCTACGAAGAAGTCCTGCATGGCCGCGCCGAGCTGGCGGTAATCACCCTGGCCCCGGAAACCCGCGAACCGGTGCATGCGGTAGCGGTATGGGACGACCCGCTGGATTTCGTTGCAGCGCCCGAACACCCGCTGGCACGCAGTGGCGTGATCAGTCTGGCCGACGTAGCCCGTCACCCGGCGGTATTTCCCGGCGGCAATACCTTTACCCACCACATCGTGCGGCGCCTGTTCGAGGCCCAGGAACTGACGCCGAATATCGCCATGAGCACCAACTATCTGGAAACCATCAAGATGATGGTGTCGATCGGCCTGGCCTGGAGCGTACTCCCCCGCACCATGCTCGACGAGCAGGTCGCCCGCCTGCCGCTGCCCGGCATCCAGCTGGCGCGACAGCTCGGCTATATCTCGCACACCGAACGTACCCTGTCGAATGCCGCGCGAGCCTTCATGCAGTTGCTCGATGCGCAGCGCGAGAGCCTTGCACTGGCGCCCGCGCAAAGGCTAACGTGA
PROTEIN sequence
Length: 302
MDLATLNAFIAIAELGSFSEAAERLHLTQPAVSKRIASLEQQLNVRLFDRLGREVSLTEAGRALLPRAYQILNVLDDTRRALNNLSGEVSGRLTLATSHHIGLHRLPPLLRAFTRAHPQVALDIQFLDSEVAYEEVLHGRAELAVITLAPETREPVHAVAVWDDPLDFVAAPEHPLARSGVISLADVARHPAVFPGGNTFTHHIVRRLFEAQELTPNIAMSTNYLETIKMMVSIGLAWSVLPRTMLDEQVARLPLPGIQLARQLGYISHTERTLSNAARAFMQLLDAQRESLALAPAQRLT*