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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_183854_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 4273..4848

Top 3 Functional Annotations

Value Algorithm Source
methylitaconate delta2-delta3-isomerase (EC:5.3.3.6) similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 192.0
  • Bit_score: 371
  • Evalue 1.50e-100
2-methylaconitate cis-trans isomerase n=2 Tax=Pseudomonas mendocina RepID=A4XU28_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 192.0
  • Bit_score: 371
  • Evalue 5.30e-100

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGCTCATCAGCCCCAGATCAAGATTCCCGCCACCTATATCCGTGGCGGCACCAGCAAGGGCGTGTTCTTCCGCCTGCAGGACCTGCCCGAGCGCTGCCAGGTGCCGGGCGAGGCGCGTGACAAGCTGTTCATGCGCGTGATCGGCAGCCCGGATCCCTATGCCGCGCACATCGACGGCATGGGCGGCGCCACCTCCAGCACCAGCAAGTGCGTGATCCTGGCAAAGAGCGGCGTGCCCGAGCATGACGTGGACTACCTCTATGGCCAGGTCTCGATCGACTCGGCCTTTGTGGACTGGTCCGGCAACTGCGGCAACCTGTCGACCGCCGCTGGCGCGTTTGCGATCCACGCCGGCCTGATCGATCCGTCGCGCGTCCCGCAGAACGGCACCTGTGTGGTGCGTATCTGGCAGGCCAACATCAAGAAAACCATCATCGCCCATGTCCCGGTGACCGACGGCCAGGTACAGGAAACCGGTGATTTCGAGCTGGATGGCGTGACCTTTCCGGCGGCCGAGATCGTGCTGGAATTCATCGACCCCTCCGATGACGCGGGCGAGGGCGGCTCGATGTTC
PROTEIN sequence
Length: 192
MAHQPQIKIPATYIRGGTSKGVFFRLQDLPERCQVPGEARDKLFMRVIGSPDPYAAHIDGMGGATSSTSKCVILAKSGVPEHDVDYLYGQVSIDSAFVDWSGNCGNLSTAAGAFAIHAGLIDPSRVPQNGTCVVRIWQANIKKTIIAHVPVTDGQVQETGDFELDGVTFPAAEIVLEFIDPSDDAGEGGSMF