ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_216511_4

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(2324..3121)

Top 3 Functional Annotations

Value Algorithm Source
UspA domain protein n=2 Tax=Pseudomonas mendocina RepID=A4XPQ8_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 265.0
  • Bit_score: 443
  • Evalue 1.50e-121
UspA domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 265.0
  • Bit_score: 443
  • Evalue 4.20e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGTTTGCCCATATCCTCATTGCCCATGATTTGCGCGACACCGCCGACATGGCTCTGTGCCGCGCCACCCAGTTGGCCCAGCAGCACAATGCCAAGCTGACGATCTTGCACGTCCTCGACCCCACCCAGAGCAGCCAGGACCACGAAGAGGCCCACCAGTCCCTGGATCGCAGCCTGACCCAATATGCCCCGCCGGGCAGTGAACTGGTCCTGCTCGCCGGCAAACCTTCCGAAGTGGTGCTGCAGCAGGTGCAAGAACTCGGTTGCGACCTGCTGGTACTCGGCGCCCATCACCAGCGCCACGACTTCTTCTCCGGCACCAGCCTCGACCGTATCGCCAGAAACTGCAGCGTGCCGCTGCTACTGGTAGCGCGCGGCGAGTTCCAGCCTTACCAGCGCGCGCTTGCCGCCATCGACTTCTCCCTCTGCGCCTGCAGCGCCCTGGAGCAGGCCTATCACCTGCTGCCGGCAACCGCCGAACTGCATGCACTGCACGTGTTCGCGCCGGACAAGGGCACGCCCAAGCAAATCGAGGAGCAACTGCAGATCCAGCGCGCCTTGATCGATCAACTGCTTGAGGACGAAGCGCAGATCCTGCCCGCCGATGGCCCGACCCTGACCCATTCGGTGCAGCAAGGCGGCATCCTGCGCTGCCTGCAGGAACAGCTGAAAGCGCGCCGCAGCGAGTTGCTGGTGCTCGGCAGCCATGGCCGCAGCGCCTTGTCCCAGGCACTGCTCGGCAGCCTGGCGCAGCATTTCCTGCACAAGGCGCCCTGCGACATTCTGGTCGTACGCTAA
PROTEIN sequence
Length: 266
MFAHILIAHDLRDTADMALCRATQLAQQHNAKLTILHVLDPTQSSQDHEEAHQSLDRSLTQYAPPGSELVLLAGKPSEVVLQQVQELGCDLLVLGAHHQRHDFFSGTSLDRIARNCSVPLLLVARGEFQPYQRALAAIDFSLCACSALEQAYHLLPATAELHALHVFAPDKGTPKQIEEQLQIQRALIDQLLEDEAQILPADGPTLTHSVQQGGILRCLQEQLKARRSELLVLGSHGRSALSQALLGSLAQHFLHKAPCDILVVR*