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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_372647_3

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1167..1655)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter membrane protein 1, PAAT family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XP13_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 162.0
  • Bit_score: 289
  • Evalue 2.20e-75
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 312
  • Evalue 2.60e-82
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 162.0
  • Bit_score: 291
  • Evalue 1.30e-76

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
TATGTCGAACTGATCCGCAACACGCCCTTTATCGTCCAGCTGTTCTTCATCTTCTTCGGCCTGCCGGCCCTGGGCGTACGGATGAACGAGTGGGAGGCGGCGGTGCTGGCGATGGTGATCAACCTGGGGGCCTATTCCACCGAGATCATTCGCGCCGGCATCCAGGCCATCCCCGGTGGCCAGCTGGAAGCGGCTGCGGCCCTGGCCATGAACCGGCTCGAGATCTTCCGCCACGTGGTCCTGCGCCCGGCCCTGGCCAAGGTCTGGCCGGCGCTGTCGAGCCAGATCATCATCGTCATGCTCGGCTCGGCGGTGTGCTCGCAGATCTCCACCGAAGAGCTGTCGTTCGCCGCCAACTTCATCCAGTCGCGCAACTTCCGCGCCTTCGAAACCTACCTGGTCACCACCCTGCTCTATCTGGCCATGGCGATCCTGATCCGCCAGCTGCTGGCCTGGGTCGGCCGCCGCTTCATCGTCGGAGGCCGCTGA
PROTEIN sequence
Length: 163
YVELIRNTPFIVQLFFIFFGLPALGVRMNEWEAAVLAMVINLGAYSTEIIRAGIQAIPGGQLEAAAALAMNRLEIFRHVVLRPALAKVWPALSSQIIIVMLGSAVCSQISTEELSFAANFIQSRNFRAFETYLVTTLLYLAMAILIRQLLAWVGRRFIVGGR*