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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_375318_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(469..1086)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Pseudomonas sp. GM17 RepID=J2NFN4_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 206.0
  • Bit_score: 305
  • Evalue 3.80e-80
ttgA; putative efflux pump periplasmic linker TtgA Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 205.0
  • Bit_score: 396
  • Evalue 3.00e-107
antibiotic transporter similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 206.0
  • Bit_score: 305
  • Evalue 1.40e-80

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
AATGGCCAGAGCAGCGCCATGGCGGTGATCCAGCAGCTGGATCCGATCTATGTCGACGTCACCCAATCCTCGGTGGCGATGCTCAAGCTGCGCCGTGAACTGGCCAGCGGGCAGTTGCAGAAAGCCAGCGACAACGCCGCCCGGGTCAAGCTGATCCTGGAGGACGGCAGCGAATACGCCGAGCTTGGCCAACTGGAATTCTCCGAGGTCTCGGTCGATGAAGGCACCGGATCGGTGACCCTGCGCGCGGTGTTCCCCAACCCGAACCACGACCTGTTGCCGGGCATGTTCGTCCACGCCCAGCTGCAGGCCGGGGTCAACAGTCAGGCCATCCTCGCCCCGCAACAAGGCGTGACCCGCGACCTGAAAGGTCAACCCACGGCCCTGGTGGTCAATCAGGACAACAAGGTCGAGTTGCGTGAGCTCAAGGCCGACCGCACCATCGGCAATCAATGGCTGATCAACGAAGGCCTGCACAGCGGCGACCGCCTGATCACCGAGGGCCTGCAGTTCGTCAAGCCCGGCGACGAAGTCAGCGTCAGCGCGGCGCGCAATGTCCAGGCAGCCAATCCGGCCCTGGTCTCGACCAGCGCTAAAGCGCGCGGCCAGGGGGAGTAA
PROTEIN sequence
Length: 206
NGQSSAMAVIQQLDPIYVDVTQSSVAMLKLRRELASGQLQKASDNAARVKLILEDGSEYAELGQLEFSEVSVDEGTGSVTLRAVFPNPNHDLLPGMFVHAQLQAGVNSQAILAPQQGVTRDLKGQPTALVVNQDNKVELRELKADRTIGNQWLINEGLHSGDRLITEGLQFVKPGDEVSVSAARNVQAANPALVSTSAKARGQGE*