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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_386916_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1..312)

Top 3 Functional Annotations

Value Algorithm Source
permease n=1 Tax=Pseudomonas thermotolerans RepID=UPI0003758E91 similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 104.0
  • Bit_score: 177
  • Evalue 6.00e-42
YjgP/YjgQ family permease; K11720 lipopolysaccharide export system permease protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 204
  • Evalue 6.50e-50
YjgP/YjgQ family permease similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 104.0
  • Bit_score: 175
  • Evalue 8.50e-42

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGCTTAGATTGGATCGCTACATCGGCACCCAGGTATTTTTCGCGATCCTCACGGTGCTGGGGGTCATCGTCGGCCTGGCATTGCTGTTTGCCTTCATCGACGAGATGGGCGATATCGAGGGTAGTTATGGTTTGCAGGGGGCGGCCTGGTACGTCTTTCTGACCCTGCCGCGGCGGGTCTACGAGATGCTGCCGATGGCGGCCCTGATCGGGTGTCTGATCGGCCTGGGCAGCCTGGCCAGCAACAGCGAGCTGACCATCATGCGCGCCGCCGGGGTTTCGATCGGGCGCATCGTCTGGGCGGTGATGAAG
PROTEIN sequence
Length: 104
MLRLDRYIGTQVFFAILTVLGVIVGLALLFAFIDEMGDIEGSYGLQGAAWYVFLTLPRRVYEMLPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMK