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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_41851_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1939..2439)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (EC:2.7.7.49) Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 344
  • Evalue 6.40e-92
Putative reverse transcriptase-maturase-transposase n=2 Tax=Pseudomonas RepID=Q9KWW0_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 130.0
  • Bit_score: 260
  • Evalue 1.10e-66
group II intron, maturase-specific domain protein similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 129.0
  • Bit_score: 200
  • Evalue 3.00e-49

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGCCATCCGGGGACTGGAACTCTCGGAAGAGAAAACCAAGATCACCCACATTGCTGAGGGTTTTGATTTCCTTGGGCAGAACGTACGCAAGTACCAGGGTAAGCTGCTCATCAAACCGGCCAACAAGAGCGTGAAGGCGCTCCTGGACAAGGTTAGGGAAATCGTAAAGAGCAACAAGAGTGCCACACAGGCGAACCTGATCCTACAGCTCAACCCGATCATTCGTGGCTGGGCGATGTATCACCGCCATGTGGTCTCCAAGTCTCTTTTCTCATCGATAGATGCTCAAATTTGGCGTCTCTTATGGACCTGGGCCCTGCGTCGGCATCCCAATAAAGGCGCAGGCTGGGTAAGACAGAGGTACTTCCACACAGCGGGGTACCAAAAACTGGGTATTTGCAGCGCAAACCAAAGCTGGAGGTATTGTCCAACGACGGTGGCTTTTTCGCGCTTCGACGATTTCAATCGTTCGGCACGTCAAAATACGCGGTGCGGCTAA
PROTEIN sequence
Length: 167
MAIRGLELSEEKTKITHIAEGFDFLGQNVRKYQGKLLIKPANKSVKALLDKVREIVKSNKSATQANLILQLNPIIRGWAMYHRHVVSKSLFSSIDAQIWRLLWTWALRRHPNKGAGWVRQRYFHTAGYQKLGICSANQSWRYCPTTVAFSRFDDFNRSARQNTRCG*