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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_940569_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(3..1361)

Top 3 Functional Annotations

Value Algorithm Source
BCCT transporter n=1 Tax=Pseudomonas pelagia RepID=UPI0003A9ACBD similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 453.0
  • Bit_score: 802
  • Evalue 2.80e-229
choline/carnitine/betaine transporter; K03451 betaine/carnitine transporter, BCCT family Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 453.0
  • Bit_score: 882
  • Evalue 3.00e-253
BCCT transporter similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 453.0
  • Bit_score: 785
  • Evalue 7.80e-225

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATCTTCGTGCTGCTCTGCCTGTTTCTGATCGTCTCGCCGCTGGGCAAGGTACGCCTGGGCGGCAAGGAGGCGACGCCCGACTATTCCTATACCGGCTGGTTTTCCATGCTGTTCGCCGCGGGCATGGGCATCGGCCTGATGTTCTATGGCGTGGCCGAACCGATGTCGCACTTTTCCTCGGCCATGGGCGGAGTCAGTCTCGGCGAGGATGGCCTGCGCACCGACTGGGCGCCGCTGGGCGCCGCCGCCGGCAATGCGCAGGAGGCCGCGAGCCTGGCGATGGCCTCCACCATCTTCCACTGGGGCCTGCACCCTTGGGCGATCTACGCCATCGTGGCGTTGGCACTGGCGTTGTTCTCGTTCAACAAGGGCCTGCCGCTGAGCATCCGCTCGATTTTCTACCCGTTGCTCGGTGAGCGGGTGTGGGGCTGGCCGGGGCATGTGGTCGACATCCTCGCGGTGTTCGCCACCCTGTTCGGCCTGGCCACCTCCCTGGGCCTGGGCGCCGAGCAGGCGGCTGCCGGCCTCGATCACCTGTTCGGCATTACCGCGAACGATACCAGCAAGGTGCTGCTGATCATCGGCATTACCGCGATTGCCCTGATGTCGGTACTGGCCGGCCTGGACAAGGGGGTCAAGCGCCTGTCGGAAATCAACATGGTGCTGGCCATCCTGTTGCTCGGCTTCATCATTCTGGTGGGCCCGACGCTGGCGATCGTCACCGGCTTCTTCAGCAACCTGGGCAGCTACCTGGCCTATCTGCCCGAGCTGTCCAACCCCTTCGGACGCGAAGACGCCAACTTCAGCCAGGGCTGGACCGCCTTCTACTGGGCCTGGTGGATCAGCTGGTCGCCCTTCGTCGGCATGTTCATCGCCCGGGTCAGCCGCGGTCGCACGGTGCGCGAGTTCCTGGTGGCGGTGCTGCTGGTGCCTTCCCTGGCCTCGGTGCTGTGGATGACCGCCTTTGGTGGCACCGGCATCGGCCAACTGGTCGGCGCCGGTTTCACCGGGGTCGAGGATGCCGCGCTGGAGCTGAAGCTGTTCGTCATGCTTGAGCAGTTGCCGTTGGCCGAAATCAGCTCCTTTATCGGCATCGTCCTGGTGATCGTGTTCTTCGTCACCTCGTCGGACTCCGGCTCGCTGGTGATCGATACCATCACCGCCGGCGGCAAGGTCAATGCGCCGATTCCGCAGCGGGCCTTCTGGGCCATCATGGAAGGCGTGGTCGCCATCGCCCTGCTGCTTGGCGGCGGCCTGGTGGCTTTGCAGGCGATGGCGGTGTCCACCGGTCTGCCGTTCACCATCGTCTTGCTGGTGGGCTGCGTGTCGATCGTCAAAGGCTTGCTGAGCGAGCCGCGC
PROTEIN sequence
Length: 453
IFVLLCLFLIVSPLGKVRLGGKEATPDYSYTGWFSMLFAAGMGIGLMFYGVAEPMSHFSSAMGGVSLGEDGLRTDWAPLGAAAGNAQEAASLAMASTIFHWGLHPWAIYAIVALALALFSFNKGLPLSIRSIFYPLLGERVWGWPGHVVDILAVFATLFGLATSLGLGAEQAAAGLDHLFGITANDTSKVLLIIGITAIALMSVLAGLDKGVKRLSEINMVLAILLLGFIILVGPTLAIVTGFFSNLGSYLAYLPELSNPFGREDANFSQGWTAFYWAWWISWSPFVGMFIARVSRGRTVREFLVAVLLVPSLASVLWMTAFGGTGIGQLVGAGFTGVEDAALELKLFVMLEQLPLAEISSFIGIVLVIVFFVTSSDSGSLVIDTITAGGKVNAPIPQRAFWAIMEGVVAIALLLGGGLVALQAMAVSTGLPFTIVLLVGCVSIVKGLLSEPR