ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_66420_3

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 3780..4316

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBN3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 176.0
  • Bit_score: 175
  • Evalue 5.20e-41
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 1.70e-95
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 175
  • Evalue 1.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCTGTGTTATCGCGATGGCGAGGCGGGAGCGTTTGATGTTCTCTACCGGCGCCATCGCGGCGGACTCTACCGCTACATCGTGCGCCTGTGCGCGAATGCTGCGGTGGCCGACGAGCTGTTCCAGGAGGTGTGGACGAACCTGATCCGCGCCCGCGCGAGCTATACGGTTACCGCGAAGTTTACGACCTATCTTTTTCGACTCGCGCATAATCGCGTGGTCGACTATTTCCGCGCTCAGGGCGGCCGGACGGCGTTGTCGCTGGACGATGACGACCCTCCGGGCCTGCCAGAGCTTCCGGCGTCCCGGCGCGACCAGCCGGAGACTGCGCTCGAGATCAAGCAGCAGGCCGCGCGGCTGATCGAGCTCGTCTCCGGGCTGCCCGCGCCGCAGCGGGAAGCGTTCATGCTGCAGCTGGAGGGCGGATTGAGCATCGAAGAGATTGCGGAGGCGACCGGTGTTTCGCGCGAGACCGCGAAGAGCCGGTTGCGCTACGCGCTGGCGAAACTGCGCCATGGCATGGGCGAATGGCAATGA
PROTEIN sequence
Length: 179
MLCYRDGEAGAFDVLYRRHRGGLYRYIVRLCANAAVADELFQEVWTNLIRARASYTVTAKFTTYLFRLAHNRVVDYFRAQGGRTALSLDDDDPPGLPELPASRRDQPETALEIKQQAARLIELVSGLPAPQREAFMLQLEGGLSIEEIAEATGVSRETAKSRLRYALAKLRHGMGEWQ*