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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_394123_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 237..1037

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Pseudomonas putida S610 RepID=V6J5I8_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 266.0
  • Bit_score: 454
  • Evalue 8.60e-125
putative LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 267.0
  • Bit_score: 522
  • Evalue 4.70e-145
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 266.0
  • Bit_score: 452
  • Evalue 9.20e-125

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAAAGCGCCCCGCGTGACCCTCGATCAATGGCGTACGTTGCAGGCCGTAGTCGATCAGGGTGGCTTTGCCCAGGCCGCCGAGGTACTGCATCGCTCGCAATCCTCGGTCAGCTATACCATTGCGCGGATGCAGGAACAGCTCAGCGTGCCGTTGCTGCGCATCGACGGGCGCAAGGCCGTGCTCACCGAGGCCGGCGACGTGCTGTTGCGCCGTTCGCGGCAACTGGTCAAGCAGGCCAGCCAGCTGGAAGACCTGGCCTACAACATGGATCAGGGCTGGGAAGCCGAAGTTCGCCTGGTGGTTGACGCCGCCTACCCGACCGCACGGCTGATCAGGGCGCTGGCCGCCTTCATCCCGCAGAGTCGCGGCTGCCGTGTGCGCCTGCGCGAGGAAGTGCTGTCGGGCGTCGAGGAAGTACTGCTGGAAGGCACCGCCGATCTGGCCATCAGCAGCCTGTCCATGGTCGGCTATCTGGGCCATGAACTCAGCGAAGTGGAATTCGTCGCGGTTGCCCACCCCGACCATCAGCTGCACAAGATGCAACGCAAGCTGACCTTCGAGGATTTGCAGAACCAGTTGCAGGTGGTTATCCGCGACTCGGGGCGCAGCAAACCGCGCGACGTCGGCTGGCTGGGTGCCGAGCAACGCTGGACGGTCAGCAGCCTGTCGACCGCAGCCAGCTTCGTCAGCAGCGGCCTCGGTTTCGCCTGGCTGCCACGCCACCTGATCGATCGGGAGTTGTGTGAAGGCATCCTCAAACCCCTGAAGCTGGAACAGGGCGGCAGCAGCCACCCACGC
PROTEIN sequence
Length: 267
MKAPRVTLDQWRTLQAVVDQGGFAQAAEVLHRSQSSVSYTIARMQEQLSVPLLRIDGRKAVLTEAGDVLLRRSRQLVKQASQLEDLAYNMDQGWEAEVRLVVDAAYPTARLIRALAAFIPQSRGCRVRLREEVLSGVEEVLLEGTADLAISSLSMVGYLGHELSEVEFVAVAHPDHQLHKMQRKLTFEDLQNQLQVVIRDSGRSKPRDVGWLGAEQRWTVSSLSTAASFVSSGLGFAWLPRHLIDRELCEGILKPLKLEQGGSSHPR