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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_29572_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1..651)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Halomonas sp. PBN3 RepID=U7NP33_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 217.0
  • Bit_score: 331
  • Evalue 5.20e-88
DNA-binding transcriptional regulator CsiR Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 217.0
  • Bit_score: 426
  • Evalue 2.20e-116
DNA-binding transcriptional regulator CsiR similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 217.0
  • Bit_score: 326
  • Evalue 6.20e-87

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGAAGCACCAGTTTTTCGGGAAAACTTCGCCGTGCGTGGCTATGACGTGCTCAAGCGGGACATCATTCGCGGGCTGTTCAAGCCCGGCGAAAAGCTGCTGATGAGCGGTTTGAAGGAGCGCTACGGGCTGGGCGTCGGACCGTTGCGCGAGGCCTTGTCACAGCTGGTGGCCGAGCGCCTGGTGGTCGCCATCAGCCAGCGCGGCTATCGGGTCGCGCCCATGTCGCTGAGCGAGTTGGCGGACATCTACGACGCCCGCGCCAACCTCGAGGCCATGCTCCTGACCCTGGCGATCGAGCGCGGCGACGACAGCTGGGAAGCGGAAATCCTCGCCCGCGCACACACCCTGGGCAAGGTCGTCGAAGTGCGCAACGCCGAAGAAATGCTCAGCCTCTGGGATGCCCGGCACAAGGCCTTCCACGAGGCCATAGTGGCGGGCTGCGGCTCGCCGCACCTGTTGCAGGTGCGTGCGTCGCTGTTCGATCAGGCCGAGCGCTATCGCCATCTCTGGTTGCAGCACACGGTGTTTTCCGAACAGGCATTGCAGGCCAAGCGGCATGAGCATGCGGTGCTGGTCGAGGCGATCCTGGCGCGCGATGCCGAACGGGCCAGCCGCATCATGCGCGAGCACCTGCTCGGCCCGGTGCCG
PROTEIN sequence
Length: 217
MEAPVFRENFAVRGYDVLKRDIIRGLFKPGEKLLMSGLKERYGLGVGPLREALSQLVAERLVVAISQRGYRVAPMSLSELADIYDARANLEAMLLTLAIERGDDSWEAEILARAHTLGKVVEVRNAEEMLSLWDARHKAFHEAIVAGCGSPHLLQVRASLFDQAERYRHLWLQHTVFSEQALQAKRHEHAVLVEAILARDAERASRIMREHLLGPVP