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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_120658_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 357..1787

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB n=1 Tax=Thiobacillus thioparus RepID=UPI000361F847 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 476.0
  • Bit_score: 692
  • Evalue 3.30e-196
rtcB_[H]; Protein RtcB Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 476.0
  • Bit_score: 948
  • Evalue 4.70e-273
rtcB_[H]; Protein RtcB similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 476.0
  • Bit_score: 683
  • Evalue 3.40e-194

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGACCTGAACAAGTTCGAAGCCGTGGGCGAACAGCGTTGGCGTATCCCGCCGCGGGGCGCCATGCGCGTGCCGGGCATCATCTTCGCCAGCCGCGAACTGCTTGCGGCGATGGACGACAAGGTCTACCAGCAGACCTGCAACGTCGCCGCCCTGCCTGGCATCGTCGAGGCCGCCTACGCCATGCCGGATGCCCATTGGGGCTATGGTTTCCCGATCGGCGGGGTGGCGGCGTTCGATGCCGAGGCCGGCGGGGTGGTCTCCGCCGGCGGCGTCGGCTTCGACATCTCCTGCGGCGTGCGCCTGCTGCACACCGGCCTGGTGGAACAGGACATCCGTGGCGTGCAACCGGCATTGGCCGATGCCCTGTTCCGCGATATCCCCGCCGGCGTCGGCAGCCGCGGCGCCTTGCGCCTCGGTGCGGCGGCGATGGACGCGATGCTGCGCGGCGGCGCGCGCTGGGCGGTGGAGCAAGGCTTTGGCAGCCCGCAGGACCTGGCGTTGATCGAGGAGCAGGGCTGCATGGCCGACGCCGAGCCGGGCGAGGTGTCTGCCGAGGCCAAGCGCCGCCAGCGCGACGAGATGGGCACCCTGGGCTCGGGCAACCACTACCTGGAAGTGCAGCGCGTCGTGCAGCTGTTCGACGAGCGCCTGGCGCAGGCCTTCGGCATCCGCCTGGGCGACATCAAGATCAGCATCCACTGCGGGTCGCGCGGCCTCGGCCACCAGATCGGCAGCGAATTCCTGCGGCGCATGGCGGTCGCCGCGGCCGGCTTCGGCATCGTGCTGCCCGACCGCGAGCTGGCCTGCGCGCCCATCGGCTCCGCGCTCGGCCAGCAGTACCTAGGGGCGATGCGGGCTGCGATCAACTGCGCATTGGCCAACCGGCAGATCATTACCAGCCTGGCCCGCGAGACCTTCGCCCGCCTGCTGCCCCAGGCGCGCTTGAGCCTGCTGTTCGACGTTTCGCACAACACCTGCAAGCGCGAGACGCACAGCCTCGATGGTCGCCCGCGCGAGCTCTACGTGCACCGCAAGGGCGCCACGCGGGCCTTCGGGCCGGGGCATCCACAGCTACCGCCGGCCTACCGTGCGGTCGGCCAGCCGGTGCTGATCGGTGGCACCATGGGCACCGCCTCCTACGTGCTGGCCGGCACCGCCACCGGCATGGGCCTGGCCTTCGGCAGCGCCTGCCATGGTGCCGGGCGGGCCATGAGCCGACACCAGGCCAGCCGCCTGTGGAGCGGCGAACGCCTGCGCGACGAACTGGCCGCGCGCGGCGTGCTGATCCGCAGCCCGTCCTGGCGCGGTGTCGCGGAAGAGGCGCCGGGCGCCTACAAGGACGTCGATGCGGTGGCCCTGGCCGCGGAGCTGGCCGGCCTGGCGCGGCGGGTCGCGCGCCTGGAGCCGCTGGTCTGCATCAAGGGCTAG
PROTEIN sequence
Length: 477
MDLNKFEAVGEQRWRIPPRGAMRVPGIIFASRELLAAMDDKVYQQTCNVAALPGIVEAAYAMPDAHWGYGFPIGGVAAFDAEAGGVVSAGGVGFDISCGVRLLHTGLVEQDIRGVQPALADALFRDIPAGVGSRGALRLGAAAMDAMLRGGARWAVEQGFGSPQDLALIEEQGCMADAEPGEVSAEAKRRQRDEMGTLGSGNHYLEVQRVVQLFDERLAQAFGIRLGDIKISIHCGSRGLGHQIGSEFLRRMAVAAAGFGIVLPDRELACAPIGSALGQQYLGAMRAAINCALANRQIITSLARETFARLLPQARLSLLFDVSHNTCKRETHSLDGRPRELYVHRKGATRAFGPGHPQLPPAYRAVGQPVLIGGTMGTASYVLAGTATGMGLAFGSACHGAGRAMSRHQASRLWSGERLRDELAARGVLIRSPSWRGVAEEAPGAYKDVDAVALAAELAGLARRVARLEPLVCIKG*