ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_130481_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1100..1678

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=2 Tax=Pseudomonas mendocina RepID=A4Y0Z7_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 192.0
  • Bit_score: 301
  • Evalue 5.10e-79
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 192.0
  • Bit_score: 301
  • Evalue 1.40e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAAAACCGCCAATCACAGCAGCGCGGATCCTCGATACCGCCCTGCAACTGGCCGATGCCTGCGGCTGGGAGCGCCTGCACCTGTTCGATGTGGCCGCCCAGCTCGACGTTGGCCTGGACGCCATCGCCACCCATTACCGGGAAAAGGACCAACTGGTCGAAGCCTGGTTCGACCGCGCCGACCGCGCCATGCTGGCGCGCAGCAGCGCCGCCGACCTCGCCGCGCTGGAGCCGGCCAAGCGCCTGGAAGAACTGCTGGTCGCCTGGCTCGACAGCCTGGCCGCGCACCGGGCGGTGACCGGACAGATGCTGCTGTACAAGCTCGAACCTGCGCACCTGCACCTGCAGGTGCTCGGCCTGCTGCGCATCAGCCGCACCGTGCAATGGTGGCGCGAGGGCGCCCGCCGGGAAAGCCGGCACCTGCGGCGCATCGCCGAGGAAAGCCTGCTGACCGGCGTCTACCTGCGCAGCTTCATCCACTGGTTGCGCCACCCCGAGGAGGATCCCGCCGAGTTCCGCGCCTTGCTGCGCCGACAATTGCGCTGCGCAGCGCTGCTGATGCTGTTGCGCCAATAG
PROTEIN sequence
Length: 193
MKKPPITAARILDTALQLADACGWERLHLFDVAAQLDVGLDAIATHYREKDQLVEAWFDRADRAMLARSSAADLAALEPAKRLEELLVAWLDSLAAHRAVTGQMLLYKLEPAHLHLQVLGLLRISRTVQWWREGARRESRHLRRIAEESLLTGVYLRSFIHWLRHPEEDPAEFRALLRRQLRCAALLMLLRQ*