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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_74480_3

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1737..2735

Top 3 Functional Annotations

Value Algorithm Source
rsmC; ribosomal RNA small subunit methyltransferase C (EC:2.1.1.172) similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 331.0
  • Bit_score: 522
  • Evalue 1.20e-145
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZXK1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 331.0
  • Bit_score: 527
  • Evalue 1.30e-146

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGACCCGCGAAGCGAAGTGCTGCTGCGCCAGGCCGACCTGTTCGGCGGCCCGTTGTTGCTCGCCGGCCTGCCGGCCGATGACCTGCTCGGCCAGTTGCCGGAAGCCCGGGGCTGGAGCTGGCACGCCGGCGAGCAGGCACTGCTGGAAACCCGCTTTGCCGGGCGCAGTCATTTTGGCGTAACGCCTCCCGCGGGCGGTTTCGCCGCCGCGGTGCTGTTCTTGCCGAAATCCCGCGAACTGACCGACTACCTGCTGGGCGCCCTCGCCGCGCAACTGGCTGGGCGCCAGCTGTTCCTGGTCGGCGAGAAGCGCGCCGGCATCGAACGTGCGGCCAAGCAGCTGGCAGCCTTCGGCAGAGCGCGCAAGCTCGACAGCGCGCGCCACTGCCAGCTCTGGCAAGTAACCGTGGAAAACGCCCCAGCCACCCCGAACCTCGAAGCCCTGGCGCGGCACTACAGCCTGCCCCTGAGTGACGGCCCGCTGAGCGTGGTCAGCCTGCCCGGGGTATTCAGCCATGGCCGCCTGGACAACGGCAGCGCCCTGCTCCTGGAACATCTGGATCAGCTGCCGGCGGGTCACCTGCTCGACTTCGGCTGCGGCGCCGGCGTGCTCGGCGCGGCACTGAAGCGCCGCTATCCGGAGAGCCAGGTGACCCTGCTGGATGTCGATGCCTTCGCCGTGGCCAGCAGCCGCCTGACCCTGGCCGCCAACGGCCTTGAGGCCAACGTCATCAGTGGCGACGGGATTGCCGCCGCCCCCCAGGGGCTGGCCGCGATCCTCAGCAACCCGCCGTTCCACCAGGGCGTGCACACCCACTACCAGGCCACGGAAAATCTGTTGCGGCATGCCGCCGAGCACCTCGAACGCCACGGTCAATTGCGCCTGGTGGCCAACAGTTTCCTCAAGTATCCACCGCTGATCGAGCAATACCTTGGCCCCTGCCATACCCTGGCCGAAGCCAAGGGCTTTCGCATCTACAGCGCGAGCAAGCCATAG
PROTEIN sequence
Length: 333
MDPRSEVLLRQADLFGGPLLLAGLPADDLLGQLPEARGWSWHAGEQALLETRFAGRSHFGVTPPAGGFAAAVLFLPKSRELTDYLLGALAAQLAGRQLFLVGEKRAGIERAAKQLAAFGRARKLDSARHCQLWQVTVENAPATPNLEALARHYSLPLSDGPLSVVSLPGVFSHGRLDNGSALLLEHLDQLPAGHLLDFGCGAGVLGAALKRRYPESQVTLLDVDAFAVASSRLTLAANGLEANVISGDGIAAAPQGLAAILSNPPFHQGVHTHYQATENLLRHAAEHLERHGQLRLVANSFLKYPPLIEQYLGPCHTLAEAKGFRIYSASKP*