ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_43950_7

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(5135..6013)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A19245 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 291.0
  • Bit_score: 555
  • Evalue 2.30e-155
integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 291.0
  • Bit_score: 347
  • Evalue 3.50e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCTCACTCGAATCTTCCCCAAGACACATCGGCGCGATGTCGAGTCGCCCGTTGGCTGCTGGCTCGAAGGCTTTGCGGACTGGCTAGTGTCCGTCGGCTACGCACGCAGTCCCACTTGCCACCATGTTCGCAGACTTAAACTGGTGCTTGAGCGCGTCGAATCGATCGTACCGGATGCCAATTTCTCGGTACACCTGCTCGATACGATATTCACTTCGGTCCGAACGCGACCTCGATACCGCGCAACCCGGCGTGCCTTTGAACGCTTCCTGGCTACTCGCGGGCTTCTGACCGTAGAGCCCGATGTCGATCGGTTTGCCCTGCTACTCAAGGTATACCGCCATCACCTCATTGAGGTTCGCGGCTTGGCGCCGCCGACAGTCAGCCAGCATATCTCGACCATTGCCGACTTTCTGACTCAGTCCGTGCCACAGGAGGCGGTGCTTCTGGATCTGTCGGCGCCGGCCGTAGAACAGTTCGTCATTACCAAGGGCCAGCTGATCAAGCGTCAGAGCCTGCAACATTCCATCGCCAGATTGCGTGCCTTTCTCCGCTACTGCTTCGACCACGGCCATATCCGGGAGCGCCTCTATACGATCGACACGCCGCGCATCTATCGCGGCGAAGCCCCTCCCCGTGCCCTTGCCTGGCGTTTGATGCAGCAACTATTGCAGTCAGTCGATCGCAACAGCAAAGCCAGTTGGCGCGACTACGCCATCCTGCACTTGATGGCTTACTACGGACTGCGGCCATCGGAGATCGTGGCACTCACCGTGGCATCGATAGATTGGACAGCCCGGACGTTGCGTGTCGATCAGCGCAAGACCAGCTCGAACTTGATCCTGCCGCTGTCAACTGCCGTTGTAGCGATTGCTTAG
PROTEIN sequence
Length: 293
MLTRIFPKTHRRDVESPVGCWLEGFADWLVSVGYARSPTCHHVRRLKLVLERVESIVPDANFSVHLLDTIFTSVRTRPRYRATRRAFERFLATRGLLTVEPDVDRFALLLKVYRHHLIEVRGLAPPTVSQHISTIADFLTQSVPQEAVLLDLSAPAVEQFVITKGQLIKRQSLQHSIARLRAFLRYCFDHGHIRERLYTIDTPRIYRGEAPPRALAWRLMQQLLQSVDRNSKASWRDYAILHLMAYYGLRPSEIVALTVASIDWTARTLRVDQRKTSSNLILPLSTAVVAIA*