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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_707591_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(2808..3605)

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein PilZ n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZBR0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 249.0
  • Bit_score: 369
  • Evalue 3.60e-99
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 249.0
  • Bit_score: 359
  • Evalue 8.10e-97

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGCCAGCCCCCCTAGTGCTACCGTATCTGCCTGGAGAGTTCTGGACCGTGTCCAACCCCTTTATCGAGGACGATGGCCCGCAACCACCGATGGTGCTCAAGGCTCCAGTGGAAATCGTGGCCAATCTGCGTCAACTGCAACAGCACCATGACCCCTTGGTTATCACCTTCCACGAACGCAACCAACGGTTTCAGAGTTACCTGATCGAAGTCGACCGCGACAAGAATCGCCTGATTCTCGACGAGATGATCCCCAACGATGCCGAGCGCTTTCTGCAAAACGGCGAATCGTTTCGCATCGAAGCCTTCCATGAAGGCGTGCGCGTAGCCTGGGAGTGTCTGCAGCCGGTACAGATAGACCAACACCAGGGGGCACGCTGCTACTTCAGCCCGATGCCTGAAGAAGTGCATTACCACCAGCGCCGCAATGCCTACAGAGCGTCACTCAAGCAAACCGACCAGGTCAAGATCGAGCTGGCCGGCGCCAAGTTGCGCAGCCCCATAACGGGACAACTGCTGGATATTTCCGCCACCGGCTGCAAATTGCGCTTGCCGGGCAATGTTGCCAGCAGCCTGCACTCTGGCCAGGTTTACGAGAGCTTTACCGCTCAACTGCCCTTTGGCGCGATGACCACCGCCGTGGAGCTGCGCCATGTGCAGTATGAAGAGAAACTCGACACGACCTTTGCCGGCGTACGCTTCCACCGCATGAACGGCCTGGAGCAACGCCAGGTCGAGCGCTTCGTCTACCAACTGCAGCGCGAGGCACGCCGCTTCGACAGCGACGGCTTGTTCTAG
PROTEIN sequence
Length: 266
MPAPLVLPYLPGEFWTVSNPFIEDDGPQPPMVLKAPVEIVANLRQLQQHHDPLVITFHERNQRFQSYLIEVDRDKNRLILDEMIPNDAERFLQNGESFRIEAFHEGVRVAWECLQPVQIDQHQGARCYFSPMPEEVHYHQRRNAYRASLKQTDQVKIELAGAKLRSPITGQLLDISATGCKLRLPGNVASSLHSGQVYESFTAQLPFGAMTTAVELRHVQYEEKLDTTFAGVRFHRMNGLEQRQVERFVYQLQREARRFDSDGLF*