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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_84180_3

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(2009..2614)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM17 RepID=J2NJK5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 198.0
  • Bit_score: 295
  • Evalue 3.90e-77
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 201.0
  • Bit_score: 240
  • Evalue 3.20e-61

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAGCCCAGTCCAGAAACGCATTCACGAAGCAGCAATCCGCCTGTTCGCCGAGAAAAACATCGGTGAGGTGAACGTCCGCGAGTTGGCGCAGGTTGCCGGCGTAGCTCGCGGCACGATCTACAACAACCTCAGCTCGATCGAGTCGTTGTTCGAGGATGTTGCCACCCACCTGAGTGGCGAGATGAATAGGCGGGTGGCCAAAAGCGCCGACCCGGAAATGGATCCGGCGCAGCGCCTGGCCAACGGCATCCGTTTCTACCTGCGCCGCGCCCATGAAGAACCTTACTGGGGGAGTTTCATTGCCCGCTATGCCGCGAGCAATGCCGCCCTCCAAGAAATGTGGAACGGCCCACCCCTTGAGGATGTACTGAGCGGCCTCAAGTCACAGCGCTATAGCTTCCGCCAGGAACAGTTGCCCAGCGTGATCAGCATGATCGGCGGCAGTGTACTCAGCGCCATCCTGCAGGTGTTGGCCGGCCACAGAACCTGGCGAGACGCCGGGTCGGACACCGCAGAACTGATTCTGATTGCGCTGGGTGTTGCACCCGAAGCAGCCCGCGTTTTTGCGACGAAGGAACTTCCGGCGCTACCAGACGCCGACTGA
PROTEIN sequence
Length: 202
MSPVQKRIHEAAIRLFAEKNIGEVNVRELAQVAGVARGTIYNNLSSIESLFEDVATHLSGEMNRRVAKSADPEMDPAQRLANGIRFYLRRAHEEPYWGSFIARYAASNAALQEMWNGPPLEDVLSGLKSQRYSFRQEQLPSVISMIGGSVLSAILQVLAGHRTWRDAGSDTAELILIALGVAPEAARVFATKELPALPDAD*