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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_388277_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1030..1596

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTY8_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 189.0
  • Bit_score: 342
  • Evalue 3.40e-91
ABC transporter Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 189.0
  • Bit_score: 383
  • Evalue 1.90e-103
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 189.0
  • Bit_score: 342
  • Evalue 9.50e-92

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCCGAGATACGCTTGCACAACCTGGCGCACAGCTACAGCCGCGCCCCCAACGGTAATGGGGATTATGCGATCCGCGAGATGAACCATGTCTGGGCACAAGGCGGTGCCTACGCCTTGCTCGGCCCTTCCGGCTGCGGCAAGTCGACCCTGCTCAATATCATTTCCGGGTTGCTCAGCCCCTCCCATGGCGAGGTGCAGTTCGACGGCAAGGTGGTCAACCACCTGCATCCCGAGCAGCGCAATATCGCCCAGGTTTTCCAGTTTCCGGTGGTCTACGACACCATGACGGTGTTCGACAACCTGGCGTTTCCGCTGCGTAATCAGGGCATGAACGAGGCCAGGATCCTGGCCAAGGTCAACGAGATCGCCGAGGTGCTGGAGCTGCACCCGCTGCTGCGCAAGAGGGCCAGCAACCTCACCGCCGACGAGAAGCAGAAGGTCTCCATGGGCCGCGGCCTGGTGCGTGACGATGTGTCGGCGATCCTCTTCGACGAGCCGCTGACGGTGATCGACCCGCACCTGAAGTGGAAGCTGCGGCGCAAGCTCAAGCAGATCCACGAGCAG
PROTEIN sequence
Length: 189
MAEIRLHNLAHSYSRAPNGNGDYAIREMNHVWAQGGAYALLGPSGCGKSTLLNIISGLLSPSHGEVQFDGKVVNHLHPEQRNIAQVFQFPVVYDTMTVFDNLAFPLRNQGMNEARILAKVNEIAEVLELHPLLRKRASNLTADEKQKVSMGRGLVRDDVSAILFDEPLTVIDPHLKWKLRRKLKQIHEQ