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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_841244_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(3..1175)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4Y0T1_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 391.0
  • Bit_score: 615
  • Evalue 4.30e-173
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 391.0
  • Bit_score: 762
  • Evalue 3.00e-217
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 391.0
  • Bit_score: 615
  • Evalue 1.20e-173

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
CGCCGGCAGAACGGCAGCTACCTGTGGGTGCTGGTGCGCGGCGTGGCCGAGCAAATCGGCCAGGACCAGCGGCGCATGGCCGGCTCGCAGACCGACATCAGCCAGCACCGCGCCGCCCAGGAACAACTGCAGCATGCCGCCCGCCACGACCCGCTCACCGGCCTGGCCAACCGCGACCGCCTGGCCGAGCTGCTGGCCCAGGCCCTGCAGCGCCAGAGCCGGGCCGGCGCGCGCGAGGCCGCCCTGCTGTTCATCGACCTGGACCGTTTCAAGCTGATCAACGACAGCCTCGGCCATCACATCGGTGACCATGTGCTGATAGAAGTGGCGCGGCGCCTCGGCCACTGCCTGCGCCCCGGCGATCACCTGATCCGCTTCGGCGGCGACGAGTTCGTGGTCCTGCTCGACGATCTCGCCTGCACCGCCGACGCCGAGCGGGTGGCCCAGCGCATGCTGGACGTCCTGCTGCCGCCGCTGCAGGTGCAGGAGCACCAGTTGGTGGTCAGCATCAGCATCGGCATCGCCGCACTCAGCGAGGAAAACGCCGGTCTCGATTCGCTGCAAGCCGCCGACCTTGCCCTGTACCGCGCCAAGGCTGCCGGCAAGGCGCAGTTCGCCCGCTACAGCACCGAAATGCAGGCCCAGGCCCAGCATCAACTGGAACTGCAGAGCGCACTGAGTCAGGCCCTGGCCAGGGACGAATTCAGCCTGGTCTATCAGCCCATCTGCCAGCTGGATCAGGCCCAGCCCTACCTGGTGGCCGTGGAAGCGCTGTTGCGCTGGCAGCACAAGGGCCACGCGGTTTCGCCGCTGGAGTTCATTCCCTGCCTGGAAGAGTCCGGGGCGATCCTGGCGGTCGGCGACTGGGTGCTGCGCCAGGCCTGCGCGCAGGTGCGTCACTGGCAACTGGCCGGGCAGACGGCGCTGCGCTGCTCGGTCAACCTGTCGAGCCGGCAACTGCAACAGGCCGACTTCGCCGCGCGGGTCGCCGATATCCTGCGCGAAAGCGGCCTGCCGCCCGCCAGCCTGGTGCTGGAGATCACCGAAAGCCAGCTGATGGAAGACAGCGCGCAGACCCTGGCCTGCCTGCGCGAACTGGCCAGTCTGGGTATCCAGTTGGCGCTGGACGATTTCGGCACCGGCTATTCCTCGCTCGGCTACCTCAACCGCTTC
PROTEIN sequence
Length: 391
RRQNGSYLWVLVRGVAEQIGQDQRRMAGSQTDISQHRAAQEQLQHAARHDPLTGLANRDRLAELLAQALQRQSRAGAREAALLFIDLDRFKLINDSLGHHIGDHVLIEVARRLGHCLRPGDHLIRFGGDEFVVLLDDLACTADAERVAQRMLDVLLPPLQVQEHQLVVSISIGIAALSEENAGLDSLQAADLALYRAKAAGKAQFARYSTEMQAQAQHQLELQSALSQALARDEFSLVYQPICQLDQAQPYLVAVEALLRWQHKGHAVSPLEFIPCLEESGAILAVGDWVLRQACAQVRHWQLAGQTALRCSVNLSSRQLQQADFAARVADILRESGLPPASLVLEITESQLMEDSAQTLACLRELASLGIQLALDDFGTGYSSLGYLNRF