ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_121155_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1975..2529

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase id=1974736 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 149.0
  • Bit_score: 238
  • Evalue 5.10e-60
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 175.0
  • Bit_score: 219
  • Evalue 9.10e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAATCATCCATCCGACAATCCGACCGCAAGGGTATTTTTCGCCCTGTGGCCTGCCGCCACCGAGTCCGCGCAACTGGCCGCGTGGCAGGCGCCGCTGAAACGCCTGTGCGGCGGGCGCGCGATGCGCGGCGAGACATTGCACAACACGCTGGCGTTCATCGGCGACGTGGAGTTGTATGCCCTGGAGGCATTGCAACTGGCGGCGCAGGAGGTCAGCGGGGAGGGCTTCGAGCTGTGTTTCGACGAGGCGCGCTACTGGGGGCATAACCATATCGTGTATGCCGCGCCGCGCCATGTGCCGCGGCAACTGGTGAATCTGGCCGATGCGCTGGGGCAGCGCTTGGACGCGCACCGTTTTCAATTTGACCGGCGCGCTTACAAGCCGCATGTCACGCTGCTGCGCAATGCGCGCTGGAGCGATACGCCGCTGCCCGCAATGCAGCCGGTATGCTGGCAGGTCGGGGATTTCGCGCTGATGCAGTCCGTGCCTCAGGACGGGTTGACGGATTACCGAGTGCTGGCGCGTTTCCCTTTGCGCGCCGCTGGCGGATAA
PROTEIN sequence
Length: 185
MNHPSDNPTARVFFALWPAATESAQLAAWQAPLKRLCGGRAMRGETLHNTLAFIGDVELYALEALQLAAQEVSGEGFELCFDEARYWGHNHIVYAAPRHVPRQLVNLADALGQRLDAHRFQFDRRAYKPHVTLLRNARWSDTPLPAMQPVCWQVGDFALMQSVPQDGLTDYRVLARFPLRAAGG*