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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_107855_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 3..116

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Rhizobium sp. CF080 RepID=J2R1F6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 37.0
  • Bit_score: 66
  • Evalue 7.20e-09
AraC family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 5.60e-12
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 35.0
  • Bit_score: 63
  • Evalue 1.70e-08

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 114
GACACCATCGCCGATGAAACCGGCTTCGCCGACCGCGAACGGATGCGCCGGGCCTTCCTGCGCACCATTGGCCAGCCGCCGCAGATGGTCAGGCGCAACGCCAGGGTGAGCTGA
PROTEIN sequence
Length: 38
DTIADETGFADRERMRRAFLRTIGQPPQMVRRNARVS*