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rifcsplowo2_12_scaffold_1620_11

Organism: RIFCSPLOWO2_12_FULL_Micrarchaeota_37_11

near complete RP 33 / 55 MC: 6 BSCG 16 / 51 ASCG 37 / 38
Location: 7901..8515

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=CG_Micra_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 199.0
  • Bit_score: 166
  • Evalue 5.00e-38
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 206.0
  • Bit_score: 134
  • Evalue 4.20e-29
exosome complex RNA-binding protein Rrp4 id=5241843 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 207.0
  • Bit_score: 134
  • Evalue 1.50e-28

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Taxonomy

CG_Micra_05 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 615
TTGAATAATAAAAGAATAGTATTGCCTGGTGAAAGAATTTCTGATAAGAAATTATTTATGCCTAATACTTTTGTTGAAGGCGAAGAAACATTCGCTGCAGTAATAGGTATGGTTGATGAAGAGGGTAAATATATTCCTTTGGAATCAAAATATAAACCATTACAAGAGGATGTTCTTGTAGGAATAGTTACAGATATAAGACATGCTGGATATTCAGTTGATATAAATCTTTCTTCTCCAGGTTTTATATCGTCTAAAGATTTTCGTGTTCAACTAGAGCTTGGCGACATTGTAAGCTGCAAGGCAGGACAGGTTGATGAAATAGGCGAAGTCGACTTTTCAGAAGTAAAAAAACTGCCACCAGGTAAGATAATACATTTTCCGCCTGCTAAAATCCCACGACTAATAGGGAGAAAAAGCAGTATGATAAGTTTAATAAGAGAGCATTCTGGCGGGGATATAGTAGTAGGGAACAACGGATATGTTTGGATAAGCGAGGCAAGCAACATTCCATTGGTACTAAAAACTATAAATATTATTATTAGAAAGGCGCACATGTCCGGCTTAACGGATGAAATTGCGCAGTATTTAAAAAATCAGAAAACAGGTGAATAA
PROTEIN sequence
Length: 205
LNNKRIVLPGERISDKKLFMPNTFVEGEETFAAVIGMVDEEGKYIPLESKYKPLQEDVLVGIVTDIRHAGYSVDINLSSPGFISSKDFRVQLELGDIVSCKAGQVDEIGEVDFSEVKKLPPGKIIHFPPAKIPRLIGRKSSMISLIREHSGGDIVVGNNGYVWISEASNIPLVLKTINIIIRKAHMSGLTDEIAQYLKNQKTGE*