ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3511_5

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 4927..6810

Top 3 Functional Annotations

Value Algorithm Source
General secretory pathway protein E n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ24_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 573.0
  • Bit_score: 487
  • Evalue 2.80e-134
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 627.0
  • Bit_score: 1218
  • Evalue 0.0
type II secretion system protein E (GspE) similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 581.0
  • Bit_score: 467
  • Evalue 5.00e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGGCCCGTAAGCGACTGGGCGACCTGCTCCAGGAAAAACAGCACATCACTGCCGATGCCTTGAAAGCCGCGATCGACGAACAAAGCACGAAGTACTCGCTGCTGGGTGAGCTGCTTCTCGAACGCGGGCTGGTATCGAAGGACGACCTGGTCGCCTCGCTTGAAGAAGTGACGCGCTTCCATTACGTAGACCCGCGTCTTGCCGCCGTCGAACGGGCCGTGCTCGAGCGCATCCCACACAGCGCGGCCACCAAGTACTGCGTGATCCCCCTGGTGTACGAAGGGACGCGCATCATCACCGTCATGGCCGAGCCGCAAAACCTGCGCGCGCTCGACGAGCTGCGGTTCCTGTCGGGGTCGGAGATTGTGCCCCGCCTGGGGTTCCGCGGAGAGATCAACGAAGCCATCCAGCGCTGCTACGGCGAAATCGAAGAGCCGGACAAAGGGGTCGAGGAGCGGCTCCCCTTTATCCAGCAAGTGGACGTTTCCGACATCCAGTTCTTCACCGCCAGTTCCAGCGAACGGAACAAGGCGGCCATGGCGGAGTTCGAGGCCGAGCTGCGGAACGAGAAGACGCCGGCAGTCCGGCTGGTCTCCGCGATTCTCTCCGCCGCGGCGACCAAGAGGGCCAGCGACATCCACATTGAACCGCAGGCTCTGGGGACGGTTGTGCGCGTGCGTGTGGACGGCGTGCTGCGCGAGCTGACCCATATTCCCAACGTCATGCAGACCTCGGTGGTTTCGCGCATCAAGATCCTGTCGGACATGGACATCGCCGAGCGCCGCGTGCCGCAGGACGGCCGCTTCCTGGTGCGCATGGGCGACCGCAACCTGGACCTGCGCGTCTCCACGCTGCCCACCCATTACGGCGAGAAGGTGGTCATGCGCCTGCTCGACCCCGCGGCCACGAGTGTGAAGTTCACCGACCTCGGTTTCTCCGAGGAGATTTCCAAGGCCCTGACGGCGATCCTGAGCATGCCTCAGGGCATGGTGCTGGTGACCGGCCCCACCGGGTCGGGGAAGAGCACCACGCTCTATGCGGCCCTCAACTTCCTGCGCTCGCCGAACATCAACATCATCACGGTGGAAGACCCCGTCGAGTACAAGATCGACGAGATCAACCAGGTGCAGGTGCATCCGAAGGCCGGCCTCACCTTTTCGAACTGCTTGCGCTCGATCCTGCGGCAAGACCCTAACGTCATCATGGTGGGTGAAATCCGCGACCTGGAGACGGCCGAAATCGCCCTGCGCGCGTCACAGACCGGCCACCTGGTGCTTTCCTCGCTGCATACCAACGACGCGGTAGCCGCCCTCACCCGCCTGCTTGACCTGGGCATTCCTCCGTTTCTGATTGCCTCTTCGCTCACCGCGGTGGTCGCCCAGCGGCTGGTGCGCACGCTGTGTTCCTGCCGCAACGAAGTGCCAGCAACCAACGACTACGCGCAGCGCCTGCTCGCGGGGGGCATCGTGGACCTCGAGAGCAAGATGTACCTGCCCTTCGGATGCCCGCGGTGCGATGGCACCGGGTACAAGGGCCGCGTGGGCATCTATGAGATGCTGATCATCGACGAGCAGGTGCGCAATTCGGTGCGCGCGGGAATTCGCGACGACGAAGTCCGCGACCTCGCCCGCAGCGGCGGCATGCGCATGATGCGGGAAGACGCCCTGGAAAAAGTCAGGGCCGGCATCACCACGCTCGATGAAGTGATGCGCGTCGTTGCCTTCGAACAATCGCCGACCATCCGCTGCCTCCGCTGCGGCAAGGGCCTGGTTCCGAATTTCCGGTTCTGCCCGTACTGCGGCGCCGGCGCGCCCCACGTGGCCACCGGTTCGCGCCTGGCCGAGGACGGTCGCGCACCTGGAGAAGGAGGAGTGGCCGGATGA
PROTEIN sequence
Length: 628
MARKRLGDLLQEKQHITADALKAAIDEQSTKYSLLGELLLERGLVSKDDLVASLEEVTRFHYVDPRLAAVERAVLERIPHSAATKYCVIPLVYEGTRIITVMAEPQNLRALDELRFLSGSEIVPRLGFRGEINEAIQRCYGEIEEPDKGVEERLPFIQQVDVSDIQFFTASSSERNKAAMAEFEAELRNEKTPAVRLVSAILSAAATKRASDIHIEPQALGTVVRVRVDGVLRELTHIPNVMQTSVVSRIKILSDMDIAERRVPQDGRFLVRMGDRNLDLRVSTLPTHYGEKVVMRLLDPAATSVKFTDLGFSEEISKALTAILSMPQGMVLVTGPTGSGKSTTLYAALNFLRSPNINIITVEDPVEYKIDEINQVQVHPKAGLTFSNCLRSILRQDPNVIMVGEIRDLETAEIALRASQTGHLVLSSLHTNDAVAALTRLLDLGIPPFLIASSLTAVVAQRLVRTLCSCRNEVPATNDYAQRLLAGGIVDLESKMYLPFGCPRCDGTGYKGRVGIYEMLIIDEQVRNSVRAGIRDDEVRDLARSGGMRMMREDALEKVRAGITTLDEVMRVVAFEQSPTIRCLRCGKGLVPNFRFCPYCGAGAPHVATGSRLAEDGRAPGEGGVAG*