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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5669_18

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(12231..13145)

Top 3 Functional Annotations

Value Algorithm Source
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curat similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 304.0
  • Bit_score: 598
  • Evalue 5.90e-168
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-); K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] id=12555744 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 293.0
  • Bit_score: 376
  • Evalue 3.40e-101
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 297.0
  • Bit_score: 283
  • Evalue 8.40e-74

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGAACGCACAGCGCACACTTCGCCGTCCGATCTCCTGCACGGGCGTCGGATTGCACTCGGGCCACAAGGTCAATCTCACGCTCAAACCCGCGCCGGCGAATTTCGGCATCCGCTTTCGCCGGACCGACCTCGGCAATCTCGAGGTGCCCGCGACCGTGCACCATCTGCTGGCCATTCAGCTCGCCACAGGCCTCGCGCGCAACGAAGTCTCGGTCGAGACGGTCGAGCACCTGCTCGCGGCCCTCGTCAGCATCGGCATCGACAACGTCATCGTGGAGCTCAACTCGCCGGAAGTTCCGATCATGGACGGCAGCGCCTCGCCGTTTGTCTACTTGATTCAGGAAGCCGGTGTCAGGCGTCTGTCGGCTCCGCGCAAGTACCTGAAGGTGCTCAGTCCGATCGCCATCACGCGCGACGACAAGAGCATCGCGCTGCATCCGTCGGACCACTTCAAGGTGACCTACAGCATCAGCTACGACCATCCGCTGTTGCGGCACCAGTTGCGGACGCTCCGGATCACCCGCGAGACATTTGTCGAGGAAGTGGCGCCGGCCCGCACGTTCACGTTCCTCAAAGACGTTGAAACAAATCGACAGAGGGGTCTGGCGCTTGGCGGCTCGCTCGAGAACGCCGTGGTGCTCGGCGACACGGGCGTGCTCAACAGCGCACTCCGATTCGAGGACGAGTTCGTCCGCCACAAGATCCTCGACGCGGTCGGCGATCTCGCGCTCGTCGGCTATCCCGTCATCGGTCATCTCGTGGCGCACCGCGCCGGTCACGCGCTGCACACCGAGTTTGCCGCCAAAGTACTGGAGCAGACGCAGGCCTGGCGCCTGATCGAAGGGCCTGTCAATGGAGACGCGTCCTTGGCAGTCCCGATGGCCGACGATGCCGTCCCGCCCCTTGTAAATTGA
PROTEIN sequence
Length: 305
MNAQRTLRRPISCTGVGLHSGHKVNLTLKPAPANFGIRFRRTDLGNLEVPATVHHLLAIQLATGLARNEVSVETVEHLLAALVSIGIDNVIVELNSPEVPIMDGSASPFVYLIQEAGVRRLSAPRKYLKVLSPIAITRDDKSIALHPSDHFKVTYSISYDHPLLRHQLRTLRITRETFVEEVAPARTFTFLKDVETNRQRGLALGGSLENAVVLGDTGVLNSALRFEDEFVRHKILDAVGDLALVGYPVIGHLVAHRAGHALHTEFAAKVLEQTQAWRLIEGPVNGDASLAVPMADDAVPPLVN*