ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6616_9

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(8074..9516)

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 480.0
  • Bit_score: 934
  • Evalue 7.10e-269
two component sigma54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=12554116 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 331.0
  • Bit_score: 359
  • Evalue 6.80e-96
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 440.0
  • Bit_score: 251
  • Evalue 4.30e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGACCGCCCTCGTCCCGGCCTGTATCCAAGCTCCCTCAACACCCCGACAGCGCGATCGGCGTCAGGCGCTGGCGGATCTGCTTGCGTCGCTCGCCCGGGCGCTCGATCGGCGAAACGACATTTCGCTTCTGCGGGGATCGTTCGAACAGATGCTGCGTCGTCTCGTGCCGGTCCGTTCGATTCAGCTGCGGGAGACGGGAAGCCGCTGGACGGGCCGTGTCGACAATGGCGCGGGCGCCGAGTCGATCGCGCTCGAAGTCTCGGGGTCGGATCAGACCACACAGGGCGTGCTCGAGGCGACGTTCGACCCTCGTTGCCGTCTCGGCGAGTGGGACTTCCAGATGTTGAGCCTCGCCGCTCACGTCGGCGCGCTCGTGCTCGAGATCGAACGGAGCCGCATCCAGCTGGCGCGCGCGGGACTGCTCGGCGGCATGCGGCCGAAACGAGACGATCTCGCGCCGCTGATTGGATCCACCTCTGCGATGCACACGCTTCGCGCGACGATCGATCGTCTGGCGGGCACCGACTTCACCGTGCTCATCGAGGGCGAGACCGGCGTCGGCAAGGAGCTCGTCGCACGCCAGATCCACGAATTGAGCCGCCGGCGGCAGGGGCCGTTTGTGGCGATTAACTGTGCGGCGCTGGTCGACACGCTGCTCGAAGCGGAGCTCTTTGGCATTGAGGATCGCACCGCGACCGGGGTACGCGGCCGGCGGGGCAAGTTCGAGTATGCCGACGGCGGCACGCTCTTTCTCGACGAAGTGTCGGACTTGTCGCTGTCGGCACAGGCCAAGCTGCTGCGGGTCGTCCAGGACCTGCACATCGAGCGTGTCGGCAGTAGCGGCGCGCACCGCGTGGACGTTCGGATTGTGGCGGCCACCAATCGAAGCCTGACCGACCTGACCGAGCGACGGCTCTTCCGGGCCGATCTGTTCTATCGGTTGAGCGGCATCGACCTGCGCGTGCCGACGCTCCGCGAGCGTCGTGCCGACGTGCTGGAGCTGGCACAGCACTTTCTCGATCGACTCCGGCCCACGCACCCCCTTCGGCTGTCCCCGCTCGCCGCCGATGCGCTCCTCAACTACGACTGGCCGGGCAATGTGAGAGAGCTGCAGCGAACAATAGAGCGCCTCGTGACGCTCGTCGAGACCGACACCATTGAGGTCAACGACCTGCCCGCACGCGTCGGGGGCGTCTACGCCAGTGCCATCGTGCCGGCGCTCACGCGGAACGAGACGCTCCGCGCGTGGACCAGTCGCTACGCCCGCCTGGTCTTCGACCGATGCCAGGGGAGCAAGCGCGACGCCTGCCGCATCCTCGGGATCAGCTATCACACGCTGCAGACCTACCTGAAGTATCCGATTCACGAGGCCGCCGCGGCGGAGGAACCGACTGAGGGCCCGGAGACGACCGAATTCTTGACCGCTTCTGAACCCGCATAG
PROTEIN sequence
Length: 481
MTALVPACIQAPSTPRQRDRRQALADLLASLARALDRRNDISLLRGSFEQMLRRLVPVRSIQLRETGSRWTGRVDNGAGAESIALEVSGSDQTTQGVLEATFDPRCRLGEWDFQMLSLAAHVGALVLEIERSRIQLARAGLLGGMRPKRDDLAPLIGSTSAMHTLRATIDRLAGTDFTVLIEGETGVGKELVARQIHELSRRRQGPFVAINCAALVDTLLEAELFGIEDRTATGVRGRRGKFEYADGGTLFLDEVSDLSLSAQAKLLRVVQDLHIERVGSSGAHRVDVRIVAATNRSLTDLTERRLFRADLFYRLSGIDLRVPTLRERRADVLELAQHFLDRLRPTHPLRLSPLAADALLNYDWPGNVRELQRTIERLVTLVETDTIEVNDLPARVGGVYASAIVPALTRNETLRAWTSRYARLVFDRCQGSKRDACRILGISYHTLQTYLKYPIHEAAAAEEPTEGPETTEFLTASEPA*