ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14601_18

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 14256..15047

Top 3 Functional Annotations

Value Algorithm Source
PP-loop domain-containing protein; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 263.0
  • Bit_score: 529
  • Evalue 3.80e-147
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA id=12554138 bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 249.0
  • Bit_score: 378
  • Evalue 5.90e-102
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 251.0
  • Bit_score: 255
  • Evalue 2.10e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGGATACCGCAGCGAGCTTGAGGCCCGTCTCGCCAAGAAGACCACCAAGGCGATCGTCGACTACCAGATGATCGATGACGGCGACCGCGTCATGGTTGGGCTGTCGGGCGGGAAGGACAGCTGGGCGCTGCTGCAAGTGCTCGACGTCCTGCGCCAGCGCGCGCCCATCCACTTCTCGCTCGTCGCGGTCAACGTTGATTCAGGGTACAAGGCATACAAGCACGAGCTCATCGCGCGCACGTGCGAGGCGCGTGGATGGGAGTACCGCATCGAGCACACCGGCATCGGCGAGCTCATCGACGACATCCTCGACGCCGACCAGACACCGTGCTCACTCTGCGCGCGGCTTCGCCGCGGCGTGCTGTACCGGGTCGCCCGCGAAGTGGGCGCCACCAAGATCGCGCTCGGCCATCACATGGACGACTTCATCGAGACGCTGCTCCTTAATCTGTTCTTTGCCGGCGCGCTCAAGGCGATGCCGGCCAAGCTGGTGTCTGACGATGGCGAGCACGTGGTGGTGAGGCCGCTCGTGTACATCGGAGAAGCCGAGGCACGATTGTACGCCAAGGAATGCGCGCTGCCGATCATCGGCTGCTGCTGTCCGGCGTGCGGCGATCTGGCACTGCAGCGGCAGCGGACCAAGCGCCTGCTGATGGAGCTCGAAGAGGAACATCCCGGCGTGAAGCAGTCGATGCTCAAGGCGCTGGCCAACGTGGCGCCGCGCCACCTGCTCGACACCCGTCTCAACCCACCGGCCGAGCTGCGCGCCCGCGTGCCCGTTCCGGCTTGA
PROTEIN sequence
Length: 264
MGYRSELEARLAKKTTKAIVDYQMIDDGDRVMVGLSGGKDSWALLQVLDVLRQRAPIHFSLVAVNVDSGYKAYKHELIARTCEARGWEYRIEHTGIGELIDDILDADQTPCSLCARLRRGVLYRVAREVGATKIALGHHMDDFIETLLLNLFFAGALKAMPAKLVSDDGEHVVVRPLVYIGEAEARLYAKECALPIIGCCCPACGDLALQRQRTKRLLMELEEEHPGVKQSMLKALANVAPRHLLDTRLNPPAELRARVPVPA*