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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5001_12

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(10623..10946)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding region RNP-1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 107.0
  • Bit_score: 222
  • Evalue 2.40e-55
rnp-1 like RNA-binding protein id=12554817 bin=CNBR_ACIDO species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 116.0
  • Bit_score: 131
  • Evalue 5.10e-28
RNA-binding region RNP-1 similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 110.0
  • Bit_score: 116
  • Evalue 6.30e-24

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGGTCGAAAGTTATATGTCGGGAATCTTCCGTACGACACCGGTGAAACGGCACTGCAGGAGCTGTTCGCGCAGTGCGGAACGGTGGACACGGTGCGCGTCATGCGCGACATGGCGACCGGGCGCGCGCGCGGCTTCGCGTTTGTTGAAATGATGACGGACGAGGAAGCGCAGGCGGCGATTTCCAAGCTGAACGAGCACCAGCTCGGCGGCCGCGCGCTCAGCGTGAACGAAGCGCGGCCCAAGCCCGCCTTTGCGGGTGGCGGCGGGTACGGTGACGGTGGCAACGGCGGCGGGCGAGGCCGTTCGGAGCCGCGCTGGTAA
PROTEIN sequence
Length: 108
MGRKLYVGNLPYDTGETALQELFAQCGTVDTVRVMRDMATGRARGFAFVEMMTDEEAQAAISKLNEHQLGGRALSVNEARPKPAFAGGGGYGDGGNGGGRGRSEPRW*