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RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_31
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(30980..32317)
-----------------
DNA (1338bp)
protein (446aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.-); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.-)
Glutamyl-tRNA reductase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=HEM1_CARHZ
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_32
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(32349..32603)
-----------------
DNA (255bp)
protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_33
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

32657..34678
-----------------
DNA (2022bp)
protein (674aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:306 RepID=R6QIB1_9CLOT
uvrB; excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
uvrB; excinuclease ABC subunit B
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_34
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

34980..36122
-----------------
DNA (1143bp)
protein (381aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DCY9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_35
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(36110..36316)
-----------------
DNA (207bp)
protein (69aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_36
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(36335..36814)
-----------------
DNA (480bp)
protein (160aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_37
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(36884..37492)
-----------------
DNA (609bp)
protein (203aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
manganese and iron superoxide dismutase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_38
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(37734..40613)
-----------------
DNA (2880bp)
protein (960aa)
Excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
gwc:GWCH70_2991 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=18714 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Excinuclease ABC subunit A
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_39
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

40685..42829
-----------------
DNA (2145bp)
protein (715aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D933_9BACT
lytic transglycosylase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
lytic transglycosylase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_40
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

43063..43437
-----------------
DNA (375bp)
protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_41
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

43451..43957
-----------------
DNA (507bp)
protein (169aa)
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Phosphohistidine phosphatase, SixA n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I516_METB6
phosphohistidine phosphatase, SixA
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_42
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(43947..44216)
-----------------
DNA (270bp)
protein (90aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_43
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


comp(44230..44451)
-----------------
DNA (222bp)
protein (74aa)
30S ribosomal protein S18 n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SPB5_9CYAN
30S ribosomal protein S18 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
30S ribosomal protein S18
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_44
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(44572..45117)
-----------------
DNA (546bp)
protein (182aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_45
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(45229..46035)
-----------------
DNA (807bp)
protein (269aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_46
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(46072..46494)
-----------------
DNA (423bp)
protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_trna_2
unknown

Not on your lists

comp(46690..46768)
-----------------
DNA (79bp)
transferRNA
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_47
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

46870..48477
-----------------
DNA (1608bp)
protein (536aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003731307
2-isopropylmalate synthase/homocitrate synthase family protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
2-isopropylmalate synthase/homocitrate synthase family protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_48
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(48428..49534)
-----------------
DNA (1107bp)
protein (369aa)
DNA protecting protein DprA n=3 Tax=Clostridium botulinum RepID=C3L0D6_CLOB6
dprA; DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
dprA; DNA protecting protein DprA
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_49
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(49610..50485)
-----------------
DNA (876bp)
protein (292aa)
RNA polymerase sigma factor n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LX02_9FUSO
RNA polymerase sigma 28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RNA polymerase sigma 28 subunit FliA/WhiG
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_50
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(50553..51041)
-----------------
DNA (489bp)
protein (163aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_51
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

51342..52055
-----------------
DNA (714bp)
protein (238aa)
Enhancing lycopene biosynthesis protein 2 n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJG2_9AQUI
isoprenoid biosynthesis protein with amidotransferase-like domain Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
isoprenoid biosynthesis protein with amidotransferase-like domain
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_52
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

52131..52709
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B67D91
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_53
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(52744..56418)
-----------------
DNA (3675bp)
protein (1225aa)
Kelch repeat protein n=1 Tax=Leptospira noguchii str. 2007001578 RepID=M6I2B0_9LEPT
putative internalin A-like exported protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_54
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

56514..57596
-----------------
DNA (1083bp)
protein (361aa)
rlmN; ribosomal RNA large subunit methyltransferase RlmN; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. CAG:813 RepID=R7MCD3_9CLOT
rlmN; ribosomal RNA large subunit methyltransferase RlmN
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_55
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

57723..59090
-----------------
DNA (1368bp)
protein (456aa)
C-terminal processing peptidase-2 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
C-terminal processing peptidase subfamily id=4465041 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
C-terminal processing peptidase-2
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_56
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(59087..60562)
-----------------
DNA (1476bp)
protein (492aa)
pcnB2; poly A polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EBJ7_9BACT
pcnB2; poly A polymerase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_57
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

60599..63079
-----------------
DNA (2481bp)
protein (827aa)
penicillin amidase family protein; K01434 penicillin amidase [EC:3.5.1.11] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
penicillin acylase II (EC:3.5.1.11)
beta-lactam antibiotic acylase n=1 Tax=Bacillus oceanisediminis RepID=UPI000307C037
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_58
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

63090..63587
-----------------
DNA (498bp)
protein (166aa)
UPF0234 protein A966_12036 n=1 Tax=Brachyspira hampsonii 30446 RepID=L0WZW0_9SPIR
nucleotide-binding protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
nucleotide-binding protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_1221_59
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(63584..64153)
-----------------
DNA (570bp)
protein (190aa)
SNARE associated Golgi family protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein id=20044 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
SNARE associated Golgi family protein
Displaying items 31-60 of 94 in total

View Taxonomy