ggKbase home page

RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_1872_13

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: comp(12017..13396)

Top 3 Functional Annotations

Value Algorithm Source
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 459.0
  • Bit_score: 907
  • Evalue 6.80e-261
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 438.0
  • Bit_score: 463
  • Evalue 9.00e-128
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A6K0_ALKEH similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 438.0
  • Bit_score: 463
  • Evalue 3.20e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
TTGAATTGTAATGCAGTAAAAATAAATGAAATGACTGAAGCAGGTAAACAATTTGATACGTTAATAGTGGGTATGGGCAAGACCGGGTATTCCTGCGCGCGCTATCTGTCTGATCGTGGAATTGCATTTGCCATGACGGACAGCCGTGCCAGTCCGCCCATGCTGAATGAGATAACAAGGGATTATCCGCAAATACCACTATTTACCGGCGGTTTTGATCCGGGAATATTTTCCAGTGTCAAAGAATTATTGATCAGCCCCGGTGTGTCACTGCATGAATCGGCCATTATCGAGGCAATAAATAACGGGGCCAGTGTGTGTGGTGACATTGAATTATTTTGCCGGCACGCGACGGCGCCTGTTGTTGCGATCACGGGATCAAATGGCAAAAGCACAGTGACCACATTGGTCGCAGAGATGGCCAGAGAGGCAGGTTTGAAGACTGGTGTGGGCGGCAATCTTGGCACACCAGCACTGGATCTACTGCATGAAGACGGGATAAATGTTTATGTTCTGGAATTATCCAGTTTCCAGCTTGAAACAGTTTCATCTTTAAATGCCGTAGCCTCAGTGGTGCTTAATTTATCTGAAGATCACATGGATCGTTATGCCAGCATGAAGGATTACACCGGTGCCAAGGCACATATCTATGATGGCGATGGAGTCATGGTGATTAATCTGGATGATCCTCTGGTAGCAGGCTTGCAACGTGCAGGCAGGAAAATCATTGGCTTCAGTCTGTCGGAACCCTACGGTGAAAATTATGGTGTGTGTAATTATTCAGATACACGCTGGTTGCTTAAAGGCAAAACACGGCTTTTACCTGCCGGAGAAATTCGCCTGGCAGGTAATCACAATATCGCAAATGCACTCGCGGCACTTGCACTCGGTGAAGTGATTAATCTCCCCATGGAATGCATGTTAAAGGTGTTACGGACTTTCCCCGGATTGCCGCATCGTTGTGAGTGGATTGCAGAAACTGATGGCATTGGCTGGATAAATGACTCAAAAGGTACCAATGTCGGGGCATCTATTGCCGCGATTAAGGGTTTGGCAAAACAGAAAAATATTGTCCTTATCGCAGGAGGTGACGGTAAAGGGGCTGATTTTTCGCGGCTGGTTGATGTTGCAAAAGAACATATACGCGCGGCTGTATTGATCGGGCGGGACGCGCCGGTTATCCGGAAGGTACTGCAGGATGTTATCCCTGTGGAAAATGCGGGTGATATGGACTCGGCCGTCAATACTGCTGCAAGACTGGCCCAAAGTGGAGATGTTGTTTTACTGTCTCCTGCCTGTGCAAGCCTGGATATGTTTGAAGATTATCGGGCCAGAGGCGGTGCATTCAGGTCAGCAGTACAGAAACTGGTGAATCACTGA
PROTEIN sequence
Length: 460
LNCNAVKINEMTEAGKQFDTLIVGMGKTGYSCARYLSDRGIAFAMTDSRASPPMLNEITRDYPQIPLFTGGFDPGIFSSVKELLISPGVSLHESAIIEAINNGASVCGDIELFCRHATAPVVAITGSNGKSTVTTLVAEMAREAGLKTGVGGNLGTPALDLLHEDGINVYVLELSSFQLETVSSLNAVASVVLNLSEDHMDRYASMKDYTGAKAHIYDGDGVMVINLDDPLVAGLQRAGRKIIGFSLSEPYGENYGVCNYSDTRWLLKGKTRLLPAGEIRLAGNHNIANALAALALGEVINLPMECMLKVLRTFPGLPHRCEWIAETDGIGWINDSKGTNVGASIAAIKGLAKQKNIVLIAGGDGKGADFSRLVDVAKEHIRAAVLIGRDAPVIRKVLQDVIPVENAGDMDSAVNTAARLAQSGDVVLLSPACASLDMFEDYRARGGAFRSAVQKLVNH*