ggKbase home page

RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_1872_21

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: comp(21590..22429)

Top 3 Functional Annotations

Value Algorithm Source
tetrapyrrole methylase family protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 552
  • Evalue 4.40e-154
rsmI; Ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198) similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 279.0
  • Bit_score: 292
  • Evalue 1.30e-76
Ribosomal RNA small subunit methyltransferase I n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KHF7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 273.0
  • Bit_score: 299
  • Evalue 4.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGATTTCAGCCGGATTATATGTGGTGGCAACACCTATCGGTAATCTGGAGGATATAAGTGCGCGCGCTGTCAGAACCCTGAACGAGGTTGACCTGATCCTTGCAGAAGACAGCCGCCATAGCGGGAAATTATTGCAGCATTTAGGTGTACACACGCCAGTGCAGGCATATCATGACCATAATGAGCTTAAAGTTGTGGATTTTTTCCTTGAACGGTTACGGGCCAATCAATCCATAGCATTAATATCGGATGCCGGGACGCCTTTGATCAATGATCCGGGATATCACCTGGTGATTGCAGCGCATAAACACGGAATCAGGGTTATTCCGGTGCCGGGACCTTCTGCTGTCATCAGTGCCTTGTCAGTCTCAGGACTGCCGACAGACCGGTTTGTTTACGAAGGTTTTCTACCGAATAAACAGGCCGCCAGGCGGAAACAACTGGCGGCACTGGCAGGTGAACAACGGACACTGGTATTTTATGAAGTACCACACCGTATTTGTGCTTGTATCGGGGATATGGTGGATTACTTTGGTCCTGATCGAATTGCCACCCTGGCCAAGGAGATCACCAAGCACTTCGAGACCATACGCAATGACACATTGGCAGGCATTCTGGACTGGTTGCAGGAAGATCCGTTGCATCAGAAAGGGGAGTTTGTACTGATGGTGCATGGTGCCGCAGTAGATACAGGTGATGAGCTTGAGTCAGTCAGGGTACTGAAAATCCTGCTGCATTCATTACCTGTAAAAGAAGCCGTAGCCGCCGCTGCAAAGATCATGGATGGCAAAAAAAACCGTTTGTATCGACTGGCAGTTGCAATCAAAGATAAAGGATAG
PROTEIN sequence
Length: 280
MISAGLYVVATPIGNLEDISARAVRTLNEVDLILAEDSRHSGKLLQHLGVHTPVQAYHDHNELKVVDFFLERLRANQSIALISDAGTPLINDPGYHLVIAAHKHGIRVIPVPGPSAVISALSVSGLPTDRFVYEGFLPNKQAARRKQLAALAGEQRTLVFYEVPHRICACIGDMVDYFGPDRIATLAKEITKHFETIRNDTLAGILDWLQEDPLHQKGEFVLMVHGAAVDTGDELESVRVLKILLHSLPVKEAVAAAAKIMDGKKNRLYRLAVAIKDKG*