ggKbase home page

RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_1872_43

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: comp(42519..44378)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV97_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 619.0
  • Bit_score: 781
  • Evalue 5.40e-223
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 619.0
  • Bit_score: 1176
  • Evalue 0.0
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 619.0
  • Bit_score: 781
  • Evalue 1.50e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGAATCGTTACCCAACCTGGAAATACGTGTTGATCGCCATTATTATCATAATCGGCATTATCTATTCCTTTCCGAATATCTACGGCAGCGATCCTGCCCTGCAAATATCCTCTTCACGTGGTGCAGAAATCAGTGAACTTACCGAGCTGCAGGTGCAAATTGCATTCGATGAGGCCGGTATCAAACCGCAGAGTTATGAGATCAACCCGAATAATCTCCTGATCCGGTTCGCGGATGAAGAGACACAACTCAGGGCGCAGGATGCTGCCAGGAATGCCCTTGACAGAACTTATGTCGTGGCGCTCAATCTTGCTCCATCCACGCCTGATTGGTTGCGAAAACTGGGTGCTGAACCAATGTTTCTCGGTCTTGATTTGCGTGGTGGTGTGCACTTCCTGATGGAGGTTGATATGAATGCCGCAATCAGCAAGGCTGAGGAACGCTATGTCTCTGACTTCCGCAGTTTATTCCGTGAGAACAAAATCCGTTACCGGACCATCAGCCGCAGGGATCAGGGTGGTGTGCTGGTTCGTTTCCAGAATTCCGCCGAGCAGGAAAATGGCGTCAGGCTGATCAATAAGAATAATCCTGAAGTAAAGGTGGACAGCAGCGTAAGTGAAAGCGGTGAATTCCATGCACTTGTTACCCTGTCGGAACAATCTATCATCGAGACCAGGACGAATGCGTTACAGCAAAATATCATCACACTGCGCAAACGCGTTAACGAACTCGGTGTTGCCGAACCGGTAATACAACAACAAGGTGATCGGCGGGTGGTGGTTGAGTTACCCGGTGTACAGGATACCGCACGTGCGAAGGATATCCTGGGTGCGACAGCGACACTGGAATTCCGTATGGTGGATGACGCTCATTCCGTGCAGGATGCACTGGATGGCCGGGTGCCGGCCGGTTCAAAGCTTTATTATGACAGGGATGGCCAGCCCATGTTGCTGAGCAAACAGGTGCTCCTGACCGGCGATCATATTATTGATGCAGCATCCGGTATTGACCAGGCGAGTGGTGGCCCGGATGTGACTATCACGCTGGATGGCAAAGGTGCCCGTATCTTCAGTGCCGCGACACGCGATGAGGTCGGCAAACGCATGGCGGTGGTTTTCATTGAAACCAAGACTGAAACGGTTATGGAAGATGGTACAGCGGTAAAGAAAAAGGAAACCATTGAAGAAGTAATCAATGCCGCTACCATCAAGGAACAATTGGGTAAAAGATTTCATATCACCGGTCTCGACTCAACCCAGGAGGCGCGCAATCTGGCCCTGTTACTACGTGCCGGGGCCCTTGCTGCGCCGATAGAGATCATAGAAGAACGGACAGTCGGCCCAAGTCTGGGGCAGGACAATATCAAACAGGGCTATGAGTCTGTGATCATTGGATTTACCCTGGTACTGATTTTTATGGTTGTTTACTACAGGCTTTTCGGACTGATTGCCAATGTGGCATTGACACTCAATGTGGTATTACTGGTGGCACTCATGTCGATGTTGCAGGCGACACTGACCATGCCGGGTATTGCTGGAATCGTGTTGACTGTCGGTATGGCAGTCGATGCCAATGTTCTGATTTTTGAACGTATCCGGGAGGAAATCAGCAACGGAAATTCACCCCAGGCAAGTATCCACGCCGGATTTGAAAAGGCATTTTCATCCATTGCTGATGCCAACATAACCACTCTTATTGCGGCCCTGGTCTTGTTCAGCTTTGGTACCGGACCCATTAAAGGTTTTGCTGTGACGTTATCCCTGGGCATTATCTGTTCCATGTTTACCGCCATCATGGTCAGTCGAGCATTTATTAATCTGCTCTATGGCGGGCGTAAAGTACAAAAATTAATGATTTAA
PROTEIN sequence
Length: 620
MNRYPTWKYVLIAIIIIIGIIYSFPNIYGSDPALQISSSRGAEISELTELQVQIAFDEAGIKPQSYEINPNNLLIRFADEETQLRAQDAARNALDRTYVVALNLAPSTPDWLRKLGAEPMFLGLDLRGGVHFLMEVDMNAAISKAEERYVSDFRSLFRENKIRYRTISRRDQGGVLVRFQNSAEQENGVRLINKNNPEVKVDSSVSESGEFHALVTLSEQSIIETRTNALQQNIITLRKRVNELGVAEPVIQQQGDRRVVVELPGVQDTARAKDILGATATLEFRMVDDAHSVQDALDGRVPAGSKLYYDRDGQPMLLSKQVLLTGDHIIDAASGIDQASGGPDVTITLDGKGARIFSAATRDEVGKRMAVVFIETKTETVMEDGTAVKKKETIEEVINAATIKEQLGKRFHITGLDSTQEARNLALLLRAGALAAPIEIIEERTVGPSLGQDNIKQGYESVIIGFTLVLIFMVVYYRLFGLIANVALTLNVVLLVALMSMLQATLTMPGIAGIVLTVGMAVDANVLIFERIREEISNGNSPQASIHAGFEKAFSSIADANITTLIAALVLFSFGTGPIKGFAVTLSLGIICSMFTAIMVSRAFINLLYGGRKVQKLMI*