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RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_25604_5

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: comp(4090..4671)

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SDE2_THISK similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 177.0
  • Bit_score: 229
  • Evalue 2.50e-57
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K03806 AmpD protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 413
  • Evalue 1.70e-112
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 177.0
  • Bit_score: 229
  • Evalue 7.00e-58

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Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
TTGACATTACCGATACACAATCCAATCCAGATCGATCCTCGTGGTGAATGGCTGGTGGATATCAGCAGAGTCGAATCACCTAACCGGGATGAGCGGCCGGACAATACAGAAATAGCACTGTTGGTGATCCACGGCATCAGCCTGCCGCCGGGAGAGTTTGGCGGTGGATACATTGATCAATTGTTCATGAATAATCTGGATACCCGGGATCACCCTTATTTTGCAGAGATTGCCGATACCAGGGTCTCTGCGCATATTCTCATCGACCGGGCAGGGATGATCACCCAGTATGTTCCGTTTAACAAACGGGCCTGGCATACCGGTGTCTCTGAATTCGGTGGCAGACAACGCTGCAATGATTTCTCGATTGGTGTAGAACTGGAGGGTTGTGATGATCAACCTTATACTGATGAACAATACACACAACTTGCCGCGTTAACAGCGGTCTTAATGAAACAGTGGCCAGCGATTACCAGAGATAACATAGTTGGTCATTGCCACATTGCACCGGACAGAAAGACCGATCCGGGACCAAAATTTGAATGGAAACATTATTTTGATTTACTGGAACAGTGTAACTGA
PROTEIN sequence
Length: 194
LTLPIHNPIQIDPRGEWLVDISRVESPNRDERPDNTEIALLVIHGISLPPGEFGGGYIDQLFMNNLDTRDHPYFAEIADTRVSAHILIDRAGMITQYVPFNKRAWHTGVSEFGGRQRCNDFSIGVELEGCDDQPYTDEQYTQLAALTAVLMKQWPAITRDNIVGHCHIAPDRKTDPGPKFEWKHYFDLLEQCN*