ggKbase home page

RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_350059_2

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_69_21

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(387..995)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA id=14625759 bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 203.0
  • Bit_score: 388
  • Evalue 3.40e-105
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 202.0
  • Bit_score: 388
  • Evalue 6.10e-105
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 174.0
  • Bit_score: 109
  • Evalue 1.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGAGGGGGACGCGCGTCCTCGCTGTGGCGCTGGCGGGAACCCTCATTGGGGGGAGCGCTCTTCTGTTCCCCACCGACnnnnnnnnnnnnnnnGCAAAGCCCAAGAAGCCCGCGGCCCGGAGCGACGCGCCCGCGCCCAAGCCGGAGGAAGACGAGAAGAACCAGCCGGTCACCGTGGACGCGGACCAGATGGAGAGCATGCAGAAGGAAGGCCTCGTCATCTTCACCGGCAACGTGGTGGCGCGCCAGAACAATTCGGTCCAGTACGCCGACCGGACGGAGGTCTACCTGGACCCGAAGGGCGACCGCATCATCCGGACGGTCTCGGTGGGCAACGTCAGGATCATCACCAAGGACTGCCGCATCGGCACCGCGAAGCGGGCCGAATACTACGACGCCGAGCAGCGCGTGGTGCTCATCGGCACCGCCCGGGTGTGGCAGGAGGACAACGTCGTGACGGGCGACCGGATCACGATCTACCTGGCCGAGGAGCGGAGCGTCGTCCAGAGCGGCAACCAGGAGCGCGTGAAGGCCGTCTTCTACCCCAAGTCCCCGGACGGCCGGAAGAGCGACAGACCGAAGGTGTCGGGCCCCTTCCCGTGCCCGTGA
PROTEIN sequence
Length: 203
VRGTRVLAVALAGTLIGGSALLFPTDXXXXXAKPKKPAARSDAPAPKPEEDEKNQPVTVDADQMESMQKEGLVIFTGNVVARQNNSVQYADRTEVYLDPKGDRIIRTVSVGNVRIITKDCRIGTAKRAEYYDAEQRVVLIGTARVWQEDNVVTGDRITIYLAEERSVVQSGNQERVKAVFYPKSPDGRKSDRPKVSGPFPCP*