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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_321_14

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 13717..15063

Top 3 Functional Annotations

Value Algorithm Source
Alginate biosynthesis transcriptional regulatory protein AlgB n=3 Tax=Pseudomonas RepID=I2BVY4_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 448.0
  • Bit_score: 874
  • Evalue 3.40e-251
algB; alginate biosynthesis transcriptional regulator AlgB similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 448.0
  • Bit_score: 874
  • Evalue 9.70e-252
algB; alginate biosynthesis transcriptional regulator AlgB Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 448.0
  • Bit_score: 874
  • Evalue 4.80e-251

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGGATTCAGCCAAGGAACTTCAAGGCCGCATTCTTTTAGTGGATGACGAATCCGCGATCCTGCGCACCTTCCGCTATTGCCTGGAAGATGAGGGCTACACCGTCGCCACCGCGAACAGCGCCGCGCAGGCCGATGCCCTGATGCAGCGTCAGGTGTTCGACCTGTGCTTCCTCGACCTGCGGCTGGGCGAGGACAATGGCCTGGACGTGCTGGCCCAGATGCGCGTGCAGGCTCCGTGGATGCGCGTGGTGATTGTGACCGCCCATTCGGCTGTGGATACCGCCGTGGACGCCATCCAGGCTGGCGCCGCCGACTACCTGGTCAAACCTTGCAGCCCAGACCAATTGCGCCTGGCTACCGCCAAGCAACTGGAAGTGCGTCAGCTCTCAGCGCGGTTGGAAGCACTGGAAGGCGAAGTGCGCCAGCCCAAAGACGGCCTCGACTCCCATAGTCCGGCCATGATGGTGGTGTTGGAAACCGCGCGGCAGGTGGCCGGAACGGACGCCAACATCTTGATCCTCGGCGAGTCCGGCACCGGTAAAGGTGAGTTGGCCCGGGCGATACACGGCTGGAGCAAACGCTCGAAGAAGTCCTGCGTGACCATCAACTGCCCCTCACTGACCGCCGAACTAATGGAAAGCGAACTGTTCGGCCACAGCCGTGGCGCGTTCACCGGCGCCAGTGAAAGCACCTTGGGCCGAGTGAATCAGGCGGACGGCGGCACGCTGTTTCTCGACGAGATCGGCGATTTCCCCCTCACGTTGCAACCCAAGTTGCTGCGGTTTATCCAGGACAAAGAGTATGAGCGCGTGGGCGACCCGGTCACTCGCCGCGCCGACGTGCGCATCCTCGCAGCCACCAACCTGAACCTGGAAGACATGGTGCGCGATGGCCGGTTCCGTGAAGACTTGCTCTACCGCCTGAATGTCATCACCTTGCACTTGCCGCCGCTGCGCGAACGCAGTGAAGACATCCTGACCCTGGCTGACCGCTTCCTTGCCCGCTTCGTCAAGGAATACGCGCGCCCGGCACGCGGCTTCAGTGATAATGCCCGCGAAGCGCTACTCAACTATCGCTGGCCCGGCAACATCCGCGAACTGCGTAACGTGGTGGAACGCGCCAGCATCATCTGCCCTCAGGAAAAGGTGGAGATCAGCCACCTGGGGATGGCCGAGCAACCGGCCAACAATGCACCGCGTATCGGAGCGGCTTTGAGCCTGGACGAGCTGGAAAAAGCTCATATCGGCGCCGTACTTGCGACCAGCGACACGCTGGACCAAGCGGCCCGCACACTCGGCATCGATGCGTCGACGCTGTACCGCAAACGCAAGCAGTACAACCTTTGA
PROTEIN sequence
Length: 449
MDSAKELQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLSARLEALEGEVRQPKDGLDSHSPAMMVVLETARQVAGTDANILILGESGTGKGELARAIHGWSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFREDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDNAREALLNYRWPGNIRELRNVVERASIICPQEKVEISHLGMAEQPANNAPRIGAALSLDELEKAHIGAVLATSDTLDQAARTLGIDASTLYRKRKQYNL*