ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_81960_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 341..1027

Top 3 Functional Annotations

Value Algorithm Source
BSCG--ribosomal--protein--S3 similarity BSCG
  • Identity: null
  • Coverage: null
  • Bit_score: null
30S ribosomal protein S3 n=89 Tax=Pseudomonas RepID=RS3_PSE14 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 455
  • Evalue 4.30e-125
rpsC; protein RpsC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 455
  • Evalue 1.20e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas amygdali → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGGTCAGAAAGTACATCCCATTGGCATTCGCCTGGGAATCGTCAAGGAGCACACCTCCGTCTGGTACGCAGACGGTCGGACTTATGCGGACTACTTGTTCGCTGATCTGAAGGTGCGTGAGTATCTCCAAGACAAACTAAAAAGCGCGTCCGTAAGCCGTATCGATATCCATCGTCCGGCCCAAACTGCACGTATCACCATCCACACCGCTCGTCCAGGTATCGTTATCGGGAAGAAAGGTGAAGATGTTGAGAAACTGCGTCAGGACCTGACCAAGCAAATGGGTGTGCCTGTGCACATCAATATCGAAGAGATCCGCAAGCCGGAGCTCGACGGTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAGCGTCGCGTAATGTTCCGTCGCGCTATGAAGCGCGCCGTACAGAACGCCATGCGCATTGGTGCCAAAGGCATCAAAATCCAAGTGAGCGGTCGTCTCGGCGGTGCTGAAATCGCACGTACTGAATGGTATCGCGAAGGTCGTGTGCCACTGCACACCCTGCGTGCCGACATCGACTATGCCAACTACGAAGCTCACACCACTTACGGTGTGATCGGTGTAAAGGTTTGGATCTTCAAAGGCGAAGTAATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAA
PROTEIN sequence
Length: 229
MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYANYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK*