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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_6354_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(2..727)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=746360 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 477
  • Evalue 9.20e-132
transcription termination factor Rho n=1 Tax=Pseudomonas RepID=UPI0002EC64C6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 477
  • Evalue 6.60e-132
Transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 242.0
  • Bit_score: 477
  • Evalue 1.90e-132

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGAATCTGACTGAACTCAAGCAAAAGCCGATTACCGACCTGCTCCAACTGGCCGAAGAAATGGGCATAGAAAATATGGCCCGTTCGCGCAAGCAGGACGTGATTTTCTCCCTGCTCAAGAAGCACGCGAAAAGCGGCGAGGAAATCTCCGGTGATGGCGTGCTGGAGATTCTCCAGGACGGCTTCGGCTTCCTCCGCTCTGCAGATGCGTCCTATCTCGCCGGCCCAGATGATATCTACGTCTCGCCGAGCCAGATCCGTCGCTTCAACTTGCGCACCGGTGACACCATCGTTGGCAAGATCCGTCCTCCGAAGGAAGGCGAGCGTTACTTCGCCCTGCTCAAGGTCGACACGATCAACTTCGATCGCCCCGAGAACGCGAAAAACAAGATTCTCTTCGAGAACCTGACGCCGCTGTTCCCGACCGTGCGCATGAAGATGGAAGCCGGTAACGGCTCCACCGAAGACTTGACCGGTCGTGTGATTGACCTCTGCGCTCCAATCGGCAAAGGCCAGCGTGGCCTGATCGTCGCACCGCCGAAAGCCGGTAAAACGATCATGCTGCAGAACATTGCAGCGAACATCGCACGTAACAACCCTGAAGTTCACCTGATCGTACTGTTGATCGATGAGCGTCCGGAAGAAGTGACCGAGATGCAGCGCACCGTGCGCGGCGAAGTGGTTGCCTCGACGTTCGATGAGCCGCCAACCCGCCACGTGCAGGTT
PROTEIN sequence
Length: 242
MNLTELKQKPITDLLQLAEEMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQDGFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTINFDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHVQV