ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_30024_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(960..1823)

Top 3 Functional Annotations

Value Algorithm Source
Putative dehydrogenase n=1 Tax=Pseudomonas sp. CF150 RepID=S6KNE9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 578
  • Evalue 4.20e-162
putative dehydrogenase Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 578
  • Evalue 6.00e-162
short-chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 280.0
  • Bit_score: 497
  • Evalue 2.10e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGATTTCACTGGTAAAACCGCAATCGTCACCGGAGGTGCGCGTGGCTTGGGACTCAGTTATGCACGAGCACTGGCGCAGGCTGGGGCCCGTGTTGTCATCAGTGATATTGGCGCCGACAACGTGGGCACCGGCACCGATGCGTCGGTGGTGCAACAGGCCGCCGAGGCGTTGCGCGCCGAAGGGTTGATGGTAGCGGGCCATGGCGGTGACTTGTCCACGGACGAGGGGTGTCGGCAGTTGATCAGCTATACCCTCGAAACCTTCGGCCAACTCGATATTTTGATTCACAACGCCGGCTGGGTGGGCTACCAGCCCATCACAGAACTCGATGCTGCGTTCCTGCAGCGCGCCATGGACATCAACCTCTACGCACCGCTGTGGTTGTGCAAACATGCCTGGCCACATCTGCTGCGCTCTTGTGCGCCGCGCATCATCCTCACCACCTCCGACCGCGCCATGTATGCGCAATACGAACAGACCGGGCTGGTGGCCTACAGCGCTGGCAAGATGGCGCAAGTGGGGATCATGAATGCCTTGAGTCACGAAGGCGCTGAGGCCGGGGTGCTCGTCAACGCGATCTCGCCGGTGGCCAAGACGCGCATGTGGGGCGTGACCCAAGAGCCGGACGAACTCAAGCCGGATTGGGTGACGCCGGGCGTGTTGTTCCTGGCTTCCCGGCAGTGCACCGATACCGGCTATATCCTGCGCGCCAGCAATGGCCAATTCACCGCCACGCGTTTCAGTGAAAATCCTGGCGTGGATTACCCACGCAATCTTGCCCGGATCAAAGCAGGCAGTGCTGAAGAAGTGGCAGCCGCGTGGTCGCATATCAAACAGCCGCCCACCCAGGCCACCACCTGA
PROTEIN sequence
Length: 288
MDFTGKTAIVTGGARGLGLSYARALAQAGARVVISDIGADNVGTGTDASVVQQAAEALRAEGLMVAGHGGDLSTDEGCRQLISYTLETFGQLDILIHNAGWVGYQPITELDAAFLQRAMDINLYAPLWLCKHAWPHLLRSCAPRIILTTSDRAMYAQYEQTGLVAYSAGKMAQVGIMNALSHEGAEAGVLVNAISPVAKTRMWGVTQEPDELKPDWVTPGVLFLASRQCTDTGYILRASNGQFTATRFSENPGVDYPRNLARIKAGSAEEVAAAWSHIKQPPTQATT*