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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_266923_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 1..1200

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 774
  • Evalue 1.20e-221
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 774
  • Evalue 6.00e-221
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pseudomonas synxantha BG33R RepID=I4L617_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 774
  • Evalue 4.30e-221

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Taxonomy

Pseudomonas synxantha → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
GCTGTGATTTCGGTTAAAGAAGGTGACAAGGTCGACGCTGGCGCAATCGTGGCCAAGTGGGATCCGCACACTCACCCAATCGTTACCGAAATGAAAGGTACCGTGACCTACGTGGGCATGGAAGAAGGCATCACGATCAAGCGTCAGACTGACGAATTGACCGGTATGACCAACATTGAAGTACTCGACGCCAAAGATCGTCCAGCTGCCGGCAAAGACATCCGTCCTGCCGTGAAGATGGTCGACGACAACGGCAAGGACCTGTTGCTGCCAGGCACTGACGTAATCGCTCAGTACTTCCTGCCAGCCAACGCCCTGGTCGGTGTAGCGGATGGTGCGAAGATCGCGATCGGTGATGTTATCGCGCGTATCCCGCAAGAAACTTCGAAGACCCGTGACATCACCGGTGGTCTGCCGCGTGTTGCCGACTTGTTCGAAGCTCGTCGTCCGAAAGAAGCGTCGATTCTGGCTGAAGTCAGCGGCACCATCGCGTTCGGTAAAGAGACCAAGGGCAAGCGCCGTCTGGTCATTACCCCGAACGACGGTAGCGATCCGTATGAAGAGCTGATTCCGAAGTGGCGTCACCTGAACGTGTTCGAAGGCGAACAGGTAAACCGCGGCGAAGTTATCTCCGACGGCCCGAGCGATCCACACGATATCCTGCGTCTGCTGGGTGTGAGTGCGCTGGCCAAGTACATCGTTAACGAGATCCAGGACGTTTACCGTCTGCAAGGCGTGAAGATCAACGACAAGCACATCGAGACCATCCTGCGTCAGATGCTGCGTAAAGTTGAAATCGCTGAATCCGGCGATTCCAGTTTCATCAAGGGCGACCAGATGGAACTGACTCACGTACTGGTAGAAAACGAGCGCCTGGCGAACGAAGAGAAATTTGTCTCCAAGTTCACTCGCGTGTTGCTGGGTATCACTAAGGCGTCGTTGTCCACTGAGTCGTTCATCTCGGCGGCCTCCTTCCAGGAGACCACTCGCGTACTGACGGAAGCAGCGGTAACCGGCAAGCGCGATTACCTGCGCGGCCTGAAAGAAAACGTAGTCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTTGGCTTATCACAGCGAGCGTAAGCGTCGCCGTGATGCTGACAAGCCGCTGCGCGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAACTCAAGCGGTAACTGA
PROTEIN sequence
Length: 400
AVISVKEGDKVDAGAIVAKWDPHTHPIVTEMKGTVTYVGMEEGITIKRQTDELTGMTNIEVLDAKDRPAAGKDIRPAVKMVDDNGKDLLLPGTDVIAQYFLPANALVGVADGAKIAIGDVIARIPQETSKTRDITGGLPRVADLFEARRPKEASILAEVSGTIAFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFEGEQVNRGEVISDGPSDPHDILRLLGVSALAKYIVNEIQDVYRLQGVKINDKHIETILRQMLRKVEIAESGDSSFIKGDQMELTHVLVENERLANEEKFVSKFTRVLLGITKASLSTESFISAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRRRDADKPLRVSASEVEAALTEALNSSGN*