ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2554_9

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 8091..8654

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain/cupin domain protein n=2 Tax=Pseudomonas RepID=I2BV16_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 371
  • Evalue 5.10e-100
DNA-binding domain/cupin domain protein Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 371
  • Evalue 9.40e-100
DNA-binding domain/cupin domain protein similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 369
  • Evalue 4.20e-100
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGCACAAAGAAAATCCGCAACGGGCTTCGGTCCTGCAGCACGTCAGCCAGAACGTTCGTCGCCTGCGCCATGCCGCCGACTTGAGCCAGACCGCGCTCTCGGAAAAGTCCGGAGTCAGCCGGCGTATGCTGGTGGCGATTGAGGCGGGGGAGAAGAACGTCAGCCTGTCGACCCTGGACCGTGTCGCCGAAGCGTTGGGCGTGGCGTTCAGTGACCTGATCCAGGCGCCGGATGTGCGGGACCACAGCCGTATCAACGAGCTGGCCTGGGCGGGCGAGATTGTCGGCAGTAAGGCAGTGTTGCTGGCCAAGGCCACGGCACGGCGTGAAGTCGAATTGTGGGAGTGGCGGCTTGAGCCTGGTGATCGTTATTGCCCGGACCCTGATTTGGAAGGGTGGAGCGAGCAACTGTTTGTGTTCGAGGGCAGCCTGACGCTGGTGATAGGTGATCAGGAAACTGTCATCGAGGCTGGAGAGTTCTTTATGTTCGCCAGCCACCAGCCCCATGCTTATCGCAATGATGGGAGCGCGGCGGTACGGTTTGTTCGAAATGTGGTGATTTGA
PROTEIN sequence
Length: 188
VHKENPQRASVLQHVSQNVRRLRHAADLSQTALSEKSGVSRRMLVAIEAGEKNVSLSTLDRVAEALGVAFSDLIQAPDVRDHSRINELAWAGEIVGSKAVLLAKATARREVELWEWRLEPGDRYCPDPDLEGWSEQLFVFEGSLTLVIGDQETVIEAGEFFMFASHQPHAYRNDGSAAVRFVRNVVI*