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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_2554_13

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(12885..14084)

Top 3 Functional Annotations

Value Algorithm Source
Efflux ABC transporter, permease protein n=2 Tax=Pseudomonas RepID=I2BX15_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 399.0
  • Bit_score: 762
  • Evalue 2.90e-217
efflux ABC transporter permease Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 768
  • Evalue 5.60e-219
efflux ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 399.0
  • Bit_score: 762
  • Evalue 8.10e-218

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAGCCTGCGGGTCGAGCAGAGCCTCAGCCACCTGCTGCATGAAGCGTTTATCAGCCTGCGTACCTTGGGCAAGCGCTCGATCCTGGCGCTCCTGGGGATCATCATCGGCAGTTCCTCGGTGGTGGCGCTGATCAATATCGGCCACAACGCGGCGGTGGATGCGGCGATGATTTTCAAGGACATGGGTACCGACACCCTCATCGCCCAGTTCCCACCCAAGGGCAGCAGCAACGTGCCGATGCGCACCCAGCTCGACCTCGACGCGGTGCGCCAGGCAGTGCCGGGCATTGCCCATATCGGCGCGCTCAGCCTGTTCAGCGGGCCCATTGTGTTTCATGGGCGGACCGCCAATGCCAACTTTGTCGGCAGTACTGCGGGCATCCAGGACGCCATGCGCCTGGCGCTGCGTGAGGGGCGCTTCCTGTCACCCTTCGATGCCAACGAAACCTACGGAGTGATCGGCGACCAACTCGCCCAGGCCCTTGGCGCGCCAGGTGACCCGCTGCAACTGGGCGACCGTGTGCGTATCAACGATTACCTGTTTCTGGTGGTGGGCATCCTGCGCAACCAGCCCAGGGCCATGCTGATGCCGGTGCAAGCCAACGAATCGTTGTTTATTCCCGCCGAGGGCATGCGCCGCGTCTACGCCAACCCGCAGATCAACAACCTGATCATTCGCGCAGCGCCGGGACAAGACATGGAACGTATCGCCAGGGATGCCGCCGCCGCGCTGCAACCCCAGCTCACCGACCATAGCGTCGACATCACAGTGCCCCAGCAAATGATCGATGGCATGACCCGCCAAAGCCGCACCTTCGCCTATCTGCTGCTGGCCCTCGGCGCAATCTCACTGGTGGGCGGCGGTGTCGGGGTGATGAACGTGATGCTGATGAACGTCTCGGAACGCCGCCGTGAGATCGGCATCCGCATGGCCTTGGGCGCACGCCAGCGGGACATCCGTAATCTGTTTTTGCTCGAAGCGGTCACCCTCACCGCCGTGGGGGCCCTGTGCGGCGCAGTCCTGGGCATGTCTGCCGCCTGGGTGTATGCGTGGCTGTCGGGCTGGGCGTTTTCCCTGGCGGTGGCCGCGCTGCCCCTGGGCGTGGGCAGCACGTTGCTGGTGGGGTTGTTCTTTGGCATTTATCCGGCGGTGTCGGCCTCACGCTTGCAGCCGGTTGAGGCCCTGCGCGATGAATAA
PROTEIN sequence
Length: 400
MSLRVEQSLSHLLHEAFISLRTLGKRSILALLGIIIGSSSVVALINIGHNAAVDAAMIFKDMGTDTLIAQFPPKGSSNVPMRTQLDLDAVRQAVPGIAHIGALSLFSGPIVFHGRTANANFVGSTAGIQDAMRLALREGRFLSPFDANETYGVIGDQLAQALGAPGDPLQLGDRVRINDYLFLVVGILRNQPRAMLMPVQANESLFIPAEGMRRVYANPQINNLIIRAAPGQDMERIARDAAAALQPQLTDHSVDITVPQQMIDGMTRQSRTFAYLLLALGAISLVGGGVGVMNVMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCGAVLGMSAAWVYAWLSGWAFSLAVAALPLGVGSTLLVGLFFGIYPAVSASRLQPVEALRDE*