ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_1051_3

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(1164..2123)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=3 Tax=Pseudomonas RepID=I2BY91_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 624
  • Evalue 5.70e-176
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 624
  • Evalue 1.60e-176
LysR family transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 624
  • Evalue 8.00e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGAAACCCCACTTTCCACTTCTGGAAACCTGCCGCCAAAACCCGGCACACGAGCGCCGCTGCAACTGAGCGGGCTGGACTTTAAATTGTTGCGGGTATTTATGGCCGTGGTCGAAGCCGGCGGCTTCAGTGCCGCGCAAAACGAGCTGAACGTGGGCCTGGCGGCCATCAGCAAACAGATCTCCGATCTCGAGATTCGCATCGGCATGCGCCTGTGCACACGGGGCCGCGAAGGGTTCGGGCTGACCGAAGAAGGCAAGTTGGTGTATCAAGCATCCATCGAGTTATTTACCTCGGTGGACAGTTTTCGCGACAAGCTTAGTTCGGCGCAGAATGAACTCATCGGCGACCTGAGTGTGGGCGTTATCGATAACACCGTCTCCGACGTTAGTTCCCCACTGATTACCGCCCTGGGCAACTTACATCGCCAATCGCCAAAAATAAGATTGCGCCTACACGCCTCGCAATTGGACGAAGTTGAACGTGGGGTAGTGGAAGGGCGACTGGTCGCCGGCATCGTCCCGGTGTACCAACGCCGTGAAGAATTCGACTACTTCCCACTCTACGAAGAAAAGGCCCACGCCTACTGCGCCGTAGGGCATCCCTTGTTCACTGCGAGCGACATCACCCCCGACGCTCTTCGCCAATACGAAGTGGTCAACCATCGGTATGCGATCCATCGCGACAAGGCCAACTTCGTCAGCCACGACAGCCAGTCCGCCTCGGCTTCACAAGTGGAAGCCGTCGCCATCCTGATCCTCACCGGCCGCTTCCTGGGCTTTCTGCCAGAACACTACGCCACGCCACTGGTAAGGGAAGGGCGCCTGCGCGCACTGTGCCCAGAGCAGGTTCATTTAAGCACCGCGTTCAACCTGATCCTGCGCCACAACGCGCCGAGAAGCCCGATGGTAAAAGCCTTCGCCACAGCGCTGGGTGTAGACTTGAAGACGTCGGCCTAA
PROTEIN sequence
Length: 320
METPLSTSGNLPPKPGTRAPLQLSGLDFKLLRVFMAVVEAGGFSAAQNELNVGLAAISKQISDLEIRIGMRLCTRGREGFGLTEEGKLVYQASIELFTSVDSFRDKLSSAQNELIGDLSVGVIDNTVSDVSSPLITALGNLHRQSPKIRLRLHASQLDEVERGVVEGRLVAGIVPVYQRREEFDYFPLYEEKAHAYCAVGHPLFTASDITPDALRQYEVVNHRYAIHRDKANFVSHDSQSASASQVEAVAILILTGRFLGFLPEHYATPLVREGRLRALCPEQVHLSTAFNLILRHNAPRSPMVKAFATALGVDLKTSA*