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rifoxya1_sub10_scaffold_188_2

Organism: RIFOXYA1_WWE3_43_8

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 718..1266

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XSZ2_9BACT alias=OP11_3_372 id=5087824 tax=OP11_3 species=Caldithrix abyssi DSM 13497 genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 180.0
  • Bit_score: 219
  • Evalue 2.40e-54
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD2_FULL_WWE3_43_10_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 365
  • Evalue 5.00e-98
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 175.0
  • Bit_score: 116
  • Evalue 8.20e-24

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Taxonomy

RIFOXYD2_FULL_WWE3_43_10_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 549
ATGGAAGATTTTAATATTAAAACAGATGAAGAAATTGTTGAGATTGTCAGGGCTGACAATAAAGAACTGTATGCCCTCCTTGTTAAAAGATACCAAACTAAGCTTATGAGATATGCAGAGTATCTAATCGGAGATCACGAGAAAGCAAGTGACGCGGTTCAGCAGTCTTTAATAAAAGCATACGTTAATCTAAACGGGTTTGACACTAAAAAGAAGTTTTCCAGTTGGGTCTACCGGATTGTTCATAACGAAGCTATGAATCTAATTGATAAGCACAAGAAGGATGTAAGAATTAACCCGGATATGGATTTCGACAGCGGGGTAGATTTAGAAGATTTGTATATAAAAAACGAACTTGTATCCCACGCCCGTGATTGTATTAAAGAGATGGGTCTAATTTACCGCGAACCTTTATCGCTGTACTATCTTGATGATAAATCGTATGAAGAGATAAGCGACATTTTAAGAATCCCTATGGGTACTGTGGCAACTAGAATTAATAGGGCAAAAAATATTTTAAAGAAAATATGCCAAACAAAAGCGAAATAA
PROTEIN sequence
Length: 183
MEDFNIKTDEEIVEIVRADNKELYALLVKRYQTKLMRYAEYLIGDHEKASDAVQQSLIKAYVNLNGFDTKKKFSSWVYRIVHNEAMNLIDKHKKDVRINPDMDFDSGVDLEDLYIKNELVSHARDCIKEMGLIYREPLSLYYLDDKSYEEISDILRIPMGTVATRINRAKNILKKICQTKAK*