ggKbase home page

RIFOXYB2_FULL_Elusimicrobia_62_6_rifoxyb2_full_scaffold_5713_1

Organism: Elusimicrobia bacterium RIFOXYB2_FULL_62_6

near complete RP 45 / 55 BSCG 45 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1..1008

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 335.0
  • Bit_score: 651
  • Evalue 6.50e-184
Lipid A export ATP-binding/permease protein MsbA id=2138448 bin=GWB2_Elusimicrobium_63_22 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good - similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 336.0
  • Bit_score: 566
  • Evalue 2.50e-158
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 333.0
  • Bit_score: 328
  • Evalue 2.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Elusimicrobia_62_6_curated → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 1008
GCCACCGCCATGAGCGGGCCCATCATGGAGTTCATCGGCAGCATGGTGCTGATCGCCATCATCTACCTGGGCGGCCAGGCCATCTTCGCGGGCACTATGACCTCGGCGCACTTCTTCTCCTTCGTCGGCGGCTTCTTCACGGCCTACATGCCGCTCAAGAACATAGCCAACCTGAACGCCAAGCTGCAGATGGGCATGGCCTCCTGGGAGCGCATCTTCCAGATACTCGACGAGAAGCCGACCGTCATAGTGAAGCAGAGCACCAAGAACATAGACCGGCTGGACGGCAGCATAGAATTCAAGGGCGTCAACTACAAGTACCCGTCCCGCGACATGCAGGTGCTGAAGGACCTCTCGTTCACGATAAAGCCGGGCCAGGTGGCCGCTTTCGTCGGCCCCTCCGGCTCCGGCAAGACCACCATCATACACCTGCTGCTGCGCTTCTTCGACCCGGTGTCCGGCCGCATAGAGGTGGACGGCCACGACCTGCTGGACCTGGACACCACGGACCTGCGCGGGCACATGGGGCTGGTGACGCAGGACACGATACTTTTCGACGACACGGTGTTCAGGAATATCACCATAGGCAAGCCGGGCGCCTCGATGGCCGAGGTCGTGGAAGCAGCCAGGGCGGCCGACGCGCACGCCTTTATTGAGTCTATGCCGCAGGGCTACGAAACCGTGCTCGGCGAACGCGGCGTGAAGCTTTCCGGCGGCCAGCGCCAGCGCCTGGCCATCGCTCGCGCGATAATCAAGAAGCCGAAGATACTGCTGCTGGACGAGGCCACCTCGAACCTCGACACGGCCAGCGAGCAGGCCGTGCAGGCCTCCATAGAGAACATCCTGGGCGGCCGCACCGTGGTGATGGTGGCGCACCGGCTTTCCACCGTCAGGAACGCCGACAAGATCTTCGTGCTTAAAAAGGGCGAACTGGCCGAGACCGGCAGCCACGACGAGCTGCTGGCCAAAGGCGGGGTCTATAAAGGCCTCTACGAGGCGCAGAGCTGA
PROTEIN sequence
Length: 336
ATAMSGPIMEFIGSMVLIAIIYLGGQAIFAGTMTSAHFFSFVGGFFTAYMPLKNIANLNAKLQMGMASWERIFQILDEKPTVIVKQSTKNIDRLDGSIEFKGVNYKYPSRDMQVLKDLSFTIKPGQVAAFVGPSGSGKTTIIHLLLRFFDPVSGRIEVDGHDLLDLDTTDLRGHMGLVTQDTILFDDTVFRNITIGKPGASMAEVVEAARAADAHAFIESMPQGYETVLGERGVKLSGGQRQRLAIARAIIKKPKILLLDEATSNLDTASEQAVQASIENILGGRTVVMVAHRLSTVRNADKIFVLKKGELAETGSHDELLAKGGVYKGLYEAQS*