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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_142_33

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 34463..35326

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily protein id=1824371 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 288.0
  • Bit_score: 556
  • Evalue 1.70e-155
sigma-70 family RNA polymerase sigma factor Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 556
  • Evalue 2.40e-155
RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 287.0
  • Bit_score: 418
  • Evalue 1.20e-114

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAACTAAAAATTACAAAACAGGTTACCAACCGCGATACACAGTCGCTGGACAAGTACCTTCATGAAATTGGAAAAGAAGATTTGATTTCCGCCGAAGAAGAGGTTGAATTGGCGCGAAGAATCCGAAAAGGCGATAGCCAGGCACTTGATCGTTTGATTCGGGCAAATCTTAGATTTGTTGTCTCTGTCTCGAAACAATACCAGAACCAGGGCCTGAGTCTGCCCGATTTAATAAACGAAGGAAACTTGGGATTGATAAAAGCGGCCCAGCGATTCGATGAAACCCGTGGGTTTAAGTTCATCTCCTACGCGGTTTGGTGGATACGTCAGTCTATTTTGCAGGCTTTGGCTGAACAAGCCCGGATAGTACGGCTCCCGCTCAATAAAATTGGTTCCATCAACAAAATCAATAAAACCCTAGCAAGGTTGGAGCAGGAATTTGAACGGGAACCTTCGGCCGAAGAAATTGCACGTACTTTGGAAATCCAGCCCGAAGAGGTTAAAAAGGCACTCATGTCGAGCAGCCGGCATGTCTCAATGGATGCCCCGTTGCAGCAAGATGAAGAGGGAAGCATGTACGAAGTGATTCCAAACAAAGACATGCCGTTGCCTGACAAAAACCTGATCAACGACTCCCTCCGTAAGGAGATCGAGAGGACTTTGACCACTCTTTCACAGCGCGAAGCGGATATTCTCCGGTTATATTTTGGGTTAAATGCCACTCCTCCACATACTCTGGAGGAAATTGGTGAAAAGTTTGAGCTCACCCGCGAACGGGTCCGCCAAATCAAGGAAAAAGCCATCCGGAAACTCAAGCAGACATCGAGATGTAAAAACTTAAAAACCTATTTAGGATAA
PROTEIN sequence
Length: 288
MRQLKITKQVTNRDTQSLDKYLHEIGKEDLISAEEEVELARRIRKGDSQALDRLIRANLRFVVSVSKQYQNQGLSLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQARIVRLPLNKIGSINKINKTLARLEQEFEREPSAEEIARTLEIQPEEVKKALMSSSRHVSMDAPLQQDEEGSMYEVIPNKDMPLPDKNLINDSLRKEIERTLTTLSQREADILRLYFGLNATPPHTLEEIGEKFELTRERVRQIKEKAIRKLKQTSRCKNLKTYLG*