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RTP_01242018_0_2um_scaffold_625_1

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 3..2441

Top 3 Functional Annotations

Value Algorithm Source
VGR-related protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IZG2_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 742.0
  • Bit_score: 586
  • Evalue 3.40e-164
VGR-related protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 742.0
  • Bit_score: 586
  • Evalue 9.50e-165
VGR-related protein {ECO:0000313|EMBL:ADJ62282.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 742.0
  • Bit_score: 586
  • Evalue 4.70e-164

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2439
AAGTCGGTGCTGGCAAGTTCAGTGCCTACGCAGTTGGATGTGGGCGGTACGCAGTTCAAGCAGTTGCCGCCGATGGAGCGTTATGACTATGCGGGGATGTATGCGTTTAGTCAGTCGGATCAGGCGCAACGTCATGCCGTGTTGCAGATGCAGGCGCGGGAGGCACGTCAGCAGGTGTGGGCTGGTTTGAGTACGGTAAGGAGTCTGCGCGCAGGCTTGCGTTTTGAGATAGACGGGCATCCACGACTGGGTGTTGCAAGGGCGGTGGCGACACCTGAGGCTTGGGTCAGTACGCAGGTGATACAGGTGGGTATTAATAATCTGCCTTATGCAACCCACGGTGCCAGCAGTGATGTGTTACCGGCTTTGGCAGCTTGGTTGGAGGCGCAGTTAGCAGTGCAGGCGCAGGCGCAAGGAGAAGCACAGGCAGTTACGTTGAGCACAATGGCAGCAGATGATGTAGTAACAGACCCGCTCACTGCCCCGCTCGCTATGAATACGCGCACGCTGCTGATAGCCTCGACGCAACGTTTGGGTTATGCCAATGCCTTTATCGCCTTGCCTGCCAACCGCCCTTGGCGACCCTGGCAGTCGCGGACTTTGCACAGATTGCCGACCATGGTGGGGAGTCAGACCGCACGGGTGGTAGGGTTTGAGGGGGGAGATGGGGGCAGTGCTGGTAGTGTTGGTAGCGCTAATAGCGGCAGCAATGAGCAGGACAGCTCCGCTGCCCTGCTCGGCAATGATGAGATATGTTGTGATGCGCTGGGACGGGTGCGGATACGTTTTCAGTGGCAGGATGCGTTGGATACTGGGGGGAACCGTGCCAGTTGTTGGGTGCGGGTAGCGCAGCGTTCAGCATCCGGCGGTATGGGCAGTCAGTTTCTGCCGCGTATCGGGCAGGAAGTCCAAGTCCAGTTTATGGAGGGTGACGTCAATCGCCCGGTGGTTGTGGGTGCGTTGTACTTTGGGCAGGGTGAGGCAGGTGTGCCGGCGACGCCTGCGGGATTATTGGTGGACGCGGATACCAGTGCGCTGAATCAGGCAACCGATCACAGTGTGTCGGCGCAAAGCAATTTAACAGCAGGTTATGCACCTGCCTGGCATGGTGCGGGAGTGGGTGCGGATGCCCATAATAATGCCGCTGCACAATGGGGTATCCGCAGTCAGGAGTACAGTGGGTCTGGTTATAATCAGTTGGTGTTTGATGACAGTGATGGCGAGGGTCGGATTCAGTTGAAGACGACGCAATCAGCGACGGAGTTGAATCTGGGGCATCTCATTCACACCGCGGATAATCATCGCGGCAGTTTCCGTGGCAACGGCATTGAGCTGCGCACGGATGCCTGGGGTGGGTTGCGGGCAGGCTCAGGCTGGCTTATCACCAGCTATGGCATCCAGCACAGTCAAAGCCAGCGCCAACCTGCCGCTGACTTGCCCGCTGGGTACGGCTTATTGAACACGGCTAACACGCTGGGTGCAACGTTGAGCCAGCTGGCAGACAGCCATTTAAGTGTGGCTATCGCCGCGCTCAAAGGCAGCAGCAAAGCCAATGCCAGTGCGCTTAATGACAGCGCTGCTCCGTTACCTGCATTGGGTAAGGTGATGCAAGGCATGGTGGACGGTAAGCAACTGGATACGGCGCAGAATGACGCCGCCGCTCACAACACGCAGGCGGATGACCAGCATCTGCCACATCACACTGATCCTATCATCAGCGTCATTGCTAAGAATGATTTAAGCATGACCGCCAGACAAAGCATGCAGTTCAATGCAGGCGAAACGCTGAACATTCTGAATGCGGCAGATAGCCAGCACACCACAGGCGGGGTGTTCCGTATTCACAGTGGGCAGGCTATTGGGTTGACAGCTGGGGGATTGAAGCAGAATGCAACGGCGGGCATGCAGTTGATTACGGCTCAGGGCGACACGACGATTCAGGCGCATAACGATATTGTTAGTCTGAAGGCTAAAAACAATCTGGATATGAAGAGTGCGCAGGCAAGTATCGATTTCGCAGCGGCGACCAACATCACCCTGCGTACCGCGGGGGGTGCGTGTATCAAGATTGCTGGCGGCAATATTACCGTGCAGTGCCCAGGCAAGATTCTGGTGCAGGCCGGGCAGAAGGCGTTTACAGGCGGGACGAGTGCGAATTATGCGTTGCCAGAAATGCCGCATGGAAAATTATATTCTGCGGCGTATCAGGTGAAAGATGGGGATGATAAACCTCTGGTTAATAGTCCATACATTATGAAACTACCTAGTGGGGAAGCGCATTACGGGATTACCGACAAACAAGGTAATAGCCGAAATGCTTATAGCAATAGTGAAAAGCCAATTGAATTTACGCTTCTGGATAGCGAAAGCTGGGAACAGGAAGAGCTGAATTCAGTTCATCATGAAATGGATAGATATTGGAGTAAAAACGATGCTTAA
PROTEIN sequence
Length: 813
KSVLASSVPTQLDVGGTQFKQLPPMERYDYAGMYAFSQSDQAQRHAVLQMQAREARQQVWAGLSTVRSLRAGLRFEIDGHPRLGVARAVATPEAWVSTQVIQVGINNLPYATHGASSDVLPALAAWLEAQLAVQAQAQGEAQAVTLSTMAADDVVTDPLTAPLAMNTRTLLIASTQRLGYANAFIALPANRPWRPWQSRTLHRLPTMVGSQTARVVGFEGGDGGSAGSVGSANSGSNEQDSSAALLGNDEICCDALGRVRIRFQWQDALDTGGNRASCWVRVAQRSASGGMGSQFLPRIGQEVQVQFMEGDVNRPVVVGALYFGQGEAGVPATPAGLLVDADTSALNQATDHSVSAQSNLTAGYAPAWHGAGVGADAHNNAAAQWGIRSQEYSGSGYNQLVFDDSDGEGRIQLKTTQSATELNLGHLIHTADNHRGSFRGNGIELRTDAWGGLRAGSGWLITSYGIQHSQSQRQPAADLPAGYGLLNTANTLGATLSQLADSHLSVAIAALKGSSKANASALNDSAAPLPALGKVMQGMVDGKQLDTAQNDAAAHNTQADDQHLPHHTDPIISVIAKNDLSMTARQSMQFNAGETLNILNAADSQHTTGGVFRIHSGQAIGLTAGGLKQNATAGMQLITAQGDTTIQAHNDIVSLKAKNNLDMKSAQASIDFAAATNITLRTAGGACIKIAGGNITVQCPGKILVQAGQKAFTGGTSANYALPEMPHGKLYSAAYQVKDGDDKPLVNSPYIMKLPSGEAHYGITDKQGNSRNAYSNSEKPIEFTLLDSESWEQEELNSVHHEMDRYWSKNDA*