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RTP_01242018_0_2um_scaffold_1760_3

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 1516..2778

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor (ATP-dependent helicase rho) {ECO:0000313|EMBL:CBI09816.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBI09816.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 404.0
  • Bit_score: 760
  • Evalue 7.20e-217
Transcription termination factor (ATP-dependent helicase rho) n=1 Tax=mine drainage metagenome RepID=E6QRE4_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 404.0
  • Bit_score: 760
  • Evalue 5.20e-217
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 417.0
  • Bit_score: 744
  • Evalue 1.40e-212

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1263
ATGCATTTATCCGACCTGAAACTTCTTCACGTCACCGAAATCGTAGAAATGGCTACTGCCAATTCCATCGAAGGTGCGAACCGTTTACGCAAGCAAGAACTCATTTTTGCGTTGCTTAAAAACCAAGCCAAACAAGGCGTCAGCATCTTTGGCGAAGGCACACTGGAAGTCCTGCCGGATGGCTTTGGCTTCCTGCGCTCTCCTAACACCTCGTACCTTGCCAGCCCTGATGATATCTATATCTCGCCCTCGCAAATACGCCGCTTCAACTTACATACGGGCGACTCCATTGATGGCGAAATTCGCATTCCAAAAGATGGTGAACGCTATTTTGCACTCGTTAAAGTTGATAAAGTAAACGGCGAAGCTCCGGAAAATGCCAAGAACAAAATCCTGTTTGAAAATCTCACCCCATTACACCCTACCGAACCGTTGTTACTGGAACGCGACATACGGGCTGAAGAAAACATCACAGGGCGCATCATCGACATGATTGCGCCAATAGGGAAAGGTCAACGCGGATTATTAGTTGCCAGCCCGAAATCAGGTAAAACAGTGATGCTGCAACACATCGCCCACGCGATTACCAGCAACCATCCTGACATTACCATGATCGTCTTGCTGATAGACGAACGCCCTGAAGAAGTGACCGAAATGACACGTTCAGTGCGTGGCGAGGTAGTTGCCTCAACCTTTGACGAACCTGCGACACGCCATGTGCAAGTCGCCGAAATGGTCATCGAAAAAGCCAAACGCTTGGTAGAACACAAAAAAGACGTCGTTATTTTGCTAGATTCCATTACGCGCCTCGCGCGCGCGTATAACACCGTCATTCCCTCATCAGGCAAAGTACTGACAGGTGGCGTTGACGCCAACGCTTTGCAACGCCCAAAACGCTTCTTTGGTGCTGCACGCAATATTGAAGAAGGCGGCTCACTCACCATCATCGCCACCGCGCTGGTAGACACCGGCAGCCGTATGGATGACGTCATCTTTGAAGAATTCAAAGGTACGGGTAATATGGAAATTCATCTAGACAGACGCATGGCAGAAAAACGCCTGTACCCCGCTATCAACGTCAACCGTTCAGGCACGCGTCGTGAAGAGTTACTCATCAAGAGCGATATCCTGCAAAAAATATGGGTGCTGCGTAAACTGCTGTATCCTATGGATGACCTGGAAGCGATGGAATTCCTGCTTGACAAAGTCAAGGCAACTAAAAACAACGCTGAGTTTTTTGACTCTATGCGTAGTGGTCGCTGA
PROTEIN sequence
Length: 421
MHLSDLKLLHVTEIVEMATANSIEGANRLRKQELIFALLKNQAKQGVSIFGEGTLEVLPDGFGFLRSPNTSYLASPDDIYISPSQIRRFNLHTGDSIDGEIRIPKDGERYFALVKVDKVNGEAPENAKNKILFENLTPLHPTEPLLLERDIRAEENITGRIIDMIAPIGKGQRGLLVASPKSGKTVMLQHIAHAITSNHPDITMIVLLIDERPEEVTEMTRSVRGEVVASTFDEPATRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDDVIFEEFKGTGNMEIHLDRRMAEKRLYPAINVNRSGTRREELLIKSDILQKIWVLRKLLYPMDDLEAMEFLLDKVKATKNNAEFFDSMRSGR*