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RTP_01242018_0_2um_scaffold_13124_1

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2..1075)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 (Sigma N) factor n=1 Tax=mine drainage metagenome RepID=E6QSF6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 359.0
  • Bit_score: 429
  • Evalue 3.00e-117
RNA polymerase, sigma 54 (Sigma N) factor {ECO:0000313|EMBL:CBI10178.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 359.0
  • Bit_score: 429
  • Evalue 4.30e-117
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 366.0
  • Bit_score: 396
  • Evalue 4.70e-108

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1074
AAAAATATGAAACAAGGTTTACAACTCAAATTCTCTCAGCACCTCACGCTGACACCCCAATTACAGCAATCTATACGTTTGTTGCAATTGTCGACGTTGGAACTCAATCAAGAGTTGGAGCTGATGGTGCAGGAAAACCCGTTGTTGGAACGTGTAGACAGCATCGATGACGGCAGTCTGCGTGTAGCGGAGTTTGAAACCACATCAGCCAATCAAGAAGCGACAAGTGAAGCCGCCGCCGACACAGCGCCGCGTGAATTAACGGATTTAGATTGGGATGAAACCCCTAATTACGGTTCTGGTGATGACTTGGACGACGAGTTCGAGCCGCAAGCGAATGTGCCCGATGCGCCGCCGTTGCGTGATCATTTATTATGGCAATTGAATTTGACGCAATTATCTGAGCGTGACAGACGTTTGGTAGCATTGTTGATAGACGATCTGAATGAGGCGGGTTATTTAACGCAGACCTTAGATGAAATTCTGGCGATGCTACCCACTGAGCTAGATGTAGATATCGATGATTTGCAAATCGCGCTTAAACAGCTGCAAAATCTGGAACCGACTGGCGTGGGCGCGCGTGATTTAGCCGAATGTTTGGGTTTGCAATTACGCATTTTGCCAATTGACACGCCGCATTTAGGTTTGGCGCAACAGATAGCAGCGCAAGAGTTAGCTGCATTGGGCGCGCATGACTACGCAGGCTTGAAACGCAAGCTGCATTGCGATGAAATTTCATTAGGCGCAGCACAAAGCTTGATACAGCAGCTGAACCCGCGTCCAGGTGAAGCATTTGGTGCATCCGATACACGCTATATCATTCCAGATGTTATCGTCAAAAAATCCAAAGGGCGCTGGGTCGCGAGTTTGAATCCAGATGCCATGCCTAAGCTGCGTGTTAATCAAATGTATGCGGATATTTTATCGCGTAATCGTGATGCTAATCATCAACAGTTGTCAGGGCAGTTGCAAGAAGCTAAGTGGCTGATTAAGAATATTATGCAGCGATTTGATACGATATTGCGGGTGACGCAATGTATTGTCGATAGGCAAAAACATTTTTTTGAGCACGGT
PROTEIN sequence
Length: 358
KNMKQGLQLKFSQHLTLTPQLQQSIRLLQLSTLELNQELELMVQENPLLERVDSIDDGSLRVAEFETTSANQEATSEAAADTAPRELTDLDWDETPNYGSGDDLDDEFEPQANVPDAPPLRDHLLWQLNLTQLSERDRRLVALLIDDLNEAGYLTQTLDEILAMLPTELDVDIDDLQIALKQLQNLEPTGVGARDLAECLGLQLRILPIDTPHLGLAQQIAAQELAALGAHDYAGLKRKLHCDEISLGAAQSLIQQLNPRPGEAFGASDTRYIIPDVIVKKSKGRWVASLNPDAMPKLRVNQMYADILSRNRDANHQQLSGQLQEAKWLIKNIMQRFDTILRVTQCIVDRQKHFFEHG